RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 PCDHA6Q9UN73 950 aa26.77■■□□□ 1.88
SYMPK-212ENST00000598896 PCDHA8Q9Y5H6 950 aa26.77■■□□□ 1.88
SYMPK-212ENST00000598896 YEATS4O95619 227 aa26.76■■□□□ 1.88
SYMPK-212ENST00000598896 IREB2P48200 963 aaKnown RBP26.76■■□□□ 1.88
SYMPK-212ENST00000598896 PIK3AP1Q6ZUJ8 805 aa26.76■■□□□ 1.88
SYMPK-212ENST00000598896 CHURC1Q8WUH1 139 aa26.76■■□□□ 1.88
SYMPK-212ENST00000598896 KIFC2Q96AC6 838 aa26.76■■□□□ 1.88
SYMPK-212ENST00000598896 AFG3L2Q9Y4W6 797 aa26.76■■□□□ 1.88
SYMPK-212ENST00000598896 TRAF5O00463 557 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 USP14P54578 494 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 FMR1Q06787 632 aaKnown RBP eCLIP26.76■■□□□ 1.872e-6■■■■□ 25.6
SYMPK-212ENST00000598896 PPP1R18Q6NYC8 613 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 CNKSR2Q8WXI2 1034 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 C6orf50Q9HD87 102 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.76■■□□□ 1.87
SYMPK-212ENST00000598896 FEM1BQ9UK73 627 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 CSADQ9Y600 493 aa26.76■■□□□ 1.87
SYMPK-212ENST00000598896 WNT7AO00755 349 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 GNA11P29992 359 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 HMGCS2P54868 508 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 PTPAQ15257 358 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 FAM160B2Q86V87 743 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 NMRK2Q9NPI5 230 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 PCDHB6Q9Y5E3 794 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 PCDHA1Q9Y5I3 950 aa26.75■■□□□ 1.87
SYMPK-212ENST00000598896 TAL1P17542 331 aaPredicted RBP26.74■■□□□ 1.87
SYMPK-212ENST00000598896 STK38Q15208 465 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 MAP3K11Q16584 847 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 CLMNQ96JQ2 1002 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 PARP14Q460N5 1801 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 PTPRFP10586 1907 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 ZNF526Q8TF50 670 aaPredicted RBP26.74■■□□□ 1.87
SYMPK-212ENST00000598896 AMNQ9BXJ7 453 aa26.74■■□□□ 1.87
SYMPK-212ENST00000598896 RANBP17Q9H2T7 1088 aaKnown RBP26.74■■□□□ 1.87
SYMPK-212ENST00000598896 DCAF8L1A6NGE4 600 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 MBD3O95983 291 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 ATP2B1P20020 1258 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 ADCY7P51828 1080 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 TTLL12Q14166 644 aaPredicted RBP26.73■■□□□ 1.87
SYMPK-212ENST00000598896 SAMD1Q6SPF0 538 aaPredicted RBP26.73■■□□□ 1.87
SYMPK-212ENST00000598896 ANKRD13AQ8IZ07 590 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 C12orf42Q96LP6 360 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 RPAP3Q9H6T3 665 aaPredicted RBP26.73■■□□□ 1.87
SYMPK-212ENST00000598896 SMCHD1A6NHR9 2005 aa26.73■■□□□ 1.87
SYMPK-212ENST00000598896 SLC39A14Q15043 492 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 USH1GQ495M9 461 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 FBXO11Q86XK2 927 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 TANGO6Q9C0B7 1094 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 ELP3Q9H9T3 547 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 C19orf81C9J6K1 198 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 SPTLC2O15270 562 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 KCNG4Q8TDN1 519 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 RIC8AQ9NPQ8 531 aa26.72■■□□□ 1.87
SYMPK-212ENST00000598896 LDHDQ86WU2 507 aa26.71■■□□□ 1.87
SYMPK-212ENST00000598896 REXO1Q8N1G1 1221 aaKnown RBP26.71■■□□□ 1.87
SYMPK-212ENST00000598896 TMEM260Q9NX78 707 aa26.71■■□□□ 1.87
SYMPK-212ENST00000598896 BIN2Q9UBW5 565 aaPredicted RBP26.71■■□□□ 1.87
SYMPK-212ENST00000598896 PCDHA7Q9UN72 937 aa26.71■■□□□ 1.87
SYMPK-212ENST00000598896 CCDC194A0A1B0GVG4 234 aa26.7■■□□□ 1.87
SYMPK-212ENST00000598896 ME1P48163 572 aa26.7■■□□□ 1.87
SYMPK-212ENST00000598896 CCDC174Q6PII3 467 aa26.7■■□□□ 1.87
SYMPK-212ENST00000598896 SLF1Q9BQI6 1058 aa26.7■■□□□ 1.87
SYMPK-212ENST00000598896 GZF1Q9H116 711 aaPredicted RBP26.7■■□□□ 1.87
SYMPK-212ENST00000598896 NOL7Q9UMY1 257 aaKnown RBP26.7■■□□□ 1.87
SYMPK-212ENST00000598896 CAVIN1Q6NZI2 390 aaKnown RBP26.7■■□□□ 1.86
SYMPK-212ENST00000598896 PRPF38AQ8NAV1 312 aaKnown RBP26.7■■□□□ 1.86
SYMPK-212ENST00000598896 BICD2Q8TD16 824 aa26.7■■□□□ 1.86
SYMPK-212ENST00000598896 ZNF408Q9H9D4 720 aa26.7■■□□□ 1.86
SYMPK-212ENST00000598896 RLFQ13129 1914 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 FLOT1O75955 427 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 MARCKSP29966 332 aaPredicted RBP26.69■■□□□ 1.86
SYMPK-212ENST00000598896 UBE2SQ16763 222 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 JAKMIP3Q5VZ66 844 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 CUL5Q93034 780 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 PSTPIP2Q9H939 334 aa26.69■■□□□ 1.86
SYMPK-212ENST00000598896 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.69■■□□□ 1.86
SYMPK-212ENST00000598896 GOLGA6L4A6NEF3 574 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 TRAPPC10P48553 1259 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 CLK2P49760 499 aaKnown RBP26.68■■□□□ 1.86
SYMPK-212ENST00000598896 INF2Q27J81 1249 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 SH3D19Q5HYK7 790 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 TTC38Q5R3I4 469 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 ARMC9Q7Z3E5 817 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 OTUD5Q96G74 571 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 OPLAHO14841 1288 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 KRT25Q7Z3Z0 450 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 RBM46Q8TBY0 533 aaKnown RBP26.68■■□□□ 1.86
SYMPK-212ENST00000598896 TMEM63CQ9P1W3 806 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 PPP1R9AQ9ULJ8 1098 aa26.68■■□□□ 1.86
SYMPK-212ENST00000598896 SPDYE5A6NIY4 337 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 IRF6O14896 467 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 PPP6R2O75170 966 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 PPATQ06203 517 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 LDLRAD1Q5T700 205 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 ERO1BQ86YB8 467 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 MRVI1Q9Y6F6 885 aa26.67■■□□□ 1.86
SYMPK-212ENST00000598896 ZNF536O15090 1300 aa26.66■■□□□ 1.86
SYMPK-212ENST00000598896 LIG1P18858 919 aa26.66■■□□□ 1.86
SYMPK-212ENST00000598896 MRPL12P52815 198 aaKnown RBP26.66■■□□□ 1.86
SYMPK-212ENST00000598896 AXDND1Q5T1B0 1012 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms