RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 TRIM26Q12899 539 aaPredicted RBP5.52□□□□□ -1.53
HERC3-213ENST00000598772 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
HERC3-213ENST00000598772 ITGA7Q13683 1181 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 ANGPT1Q15389 498 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 METTL24Q5JXM2 366 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 KSR2Q6VAB6 950 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 CATSPERGQ6ZRH7 1159 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 RUBCNQ92622 972 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 VWCEQ96DN2 955 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 AGBL1Q96MI9 1066 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 MMP19Q99542 508 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 RAD9AQ99638 391 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 IDI2Q9BXS1 227 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 NSUN3Q9H649 340 aaKnown RBP5.52□□□□□ -1.53
HERC3-213ENST00000598772 MBIPQ9NS73 344 aa5.52□□□□□ -1.53
HERC3-213ENST00000598772 COL4A4P53420 1690 aaPredicted RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 MYH3P11055 1940 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 DLG5Q8TDM6 1919 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 CHL1O00533 1208 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 LINC01565O15544 149 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 NCK2O43639 380 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 DUSP11O75319 330 aaKnown RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 GTF2F1P35269 517 aaKnown RBP eCLIP5.51□□□□□ -1.53
HERC3-213ENST00000598772 BTDP43251 543 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 SLC4A3P48751 1232 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 PSMC6P62333 389 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 JAG1P78504 1218 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 DEFB103AP81534 67 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 PTPN21Q16825 1174 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 PPM1JQ5JR12 505 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 CCSAPQ6IQ19 270 aaPredicted RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 LRSAM1Q6UWE0 723 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 DZIP1Q86YF9 867 aaKnown RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 CRACR2BQ8N4Y2 399 aaPredicted RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 RIN2Q8WYP3 895 aaPredicted RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 PLA2G12BQ9BX93 195 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 SPATC1LQ9H0A9 340 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 PNNQ9H307 717 aaKnown RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 RPAP3Q9H6T3 665 aaPredicted RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 TRMT13Q9NUP7 481 aaKnown RBP5.51□□□□□ -1.53
HERC3-213ENST00000598772 NCDNQ9UBB6 729 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 NRBP1Q9UHY1 535 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 LHX6Q9UPM6 363 aa5.51□□□□□ -1.53
HERC3-213ENST00000598772 LOC285556D6RIA3 1793 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 SPDYE16A6NNV3 312 aaPredicted RBP5.5□□□□□ -1.53
HERC3-213ENST00000598772 LOC730098B7Z3J9 87 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 HOXB7P09629 217 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 FOXO4P98177 505 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 RAB3GAP1Q15042 981 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 EPC2Q52LR7 807 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 FAM47CQ5HY64 1035 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 KREMEN2Q8NCW0 462 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 PPP1R13LQ8WUF5 828 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 PLEKHF1Q96S99 279 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 TANGO6Q9C0B7 1094 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 SEMA4AQ9H3S1 761 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 MROH8Q9H579 483 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 MYH16Q9H6N6 1097 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 TSHZ2Q9NRE2 1034 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 ABCF2Q9UG63 623 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 ANGPTL2Q9UKU9 493 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 ZMIZ1Q9ULJ6 1067 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 USP18Q9UMW8 372 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 PCDHB13Q9Y5F0 798 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 DOCK2Q92608 1830 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 BPTFQ12830 3046 aa5.5□□□□□ -1.53
HERC3-213ENST00000598772 FRYQ5TBA9 3013 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 USP9XQ93008 2570 aaPredicted RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 EIF4E1BA6NMX2 242 aaKnown RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 RBAK-RBAKDNI3L0D1 243 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 PER1O15534 1290 aaPredicted RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 IFIT1P09914 478 aaKnown RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 RRP1P56182 461 aaKnown RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 WDR5P61964 334 aaKnown RBP5.49□□□□□ -1.53
HERC3-213ENST00000598772 LMOD3Q0VAK6 560 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 HYAL1Q12794 435 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 COG2Q14746 738 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 CCDC144BQ3MJ40 725 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 AP5M1Q9H0R1 490 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 HOXC10Q9NYD6 342 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 ASPMQ8IZT6 3477 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 A0A1B0GUL6 1792 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 ZZEF1O43149 2961 aa5.49□□□□□ -1.53
HERC3-213ENST00000598772 CLSPNQ9HAW4 1339 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 SCN5AQ14524 2016 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 CEP295Q9C0D2 2601 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 SPDYE4A6NLX3 237 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 LCE2BO14633 110 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 DYNC1LI2O43237 492 aaPredicted RBP5.48□□□□□ -1.53
HERC3-213ENST00000598772 PI15O43692 258 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 ZEB2O60315 1214 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 TBX10O75333 385 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 BAIAP3O94812 1187 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 GJB5O95377 273 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 GH2P01242 217 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 IQCF3P0C7M6 154 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 SUPT20HL2P0C7V6 817 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 VCAM1P19320 739 aa5.48□□□□□ -1.53
HERC3-213ENST00000598772 RFX1P22670 979 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms