RNA–Protein interactions for RNA: ENST00000598474.3

SOX2-OT-229, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 515 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-229ENST00000598474 GRM4Q14833 912 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 MTFR1Q15390 333 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 MMP19Q99542 508 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 MYL10Q9BUA6 226 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 FLRT1Q9NZU1 646 aa15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 BIN2Q9UBW5 565 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 COL11A1P12107 1806 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-229ENST00000598474 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 HMGCRP04035 888 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 PGK2P07205 417 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 LIFRP42702 1097 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 SOX10P56693 466 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 ADGRF4Q8IZF3 695 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 CHST13Q8NET6 341 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 CCPG1Q9ULG6 757 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
SOX2-OT-229ENST00000598474 IGHA2P01877 340 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 ALAS1P13196 640 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 UBXN2AP68543 259 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 KCTD2Q14681 263 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
SOX2-OT-229ENST00000598474 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 DDAH1O94760 285 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 CCL5P13501 91 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 TKFCQ3LXA3 575 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 SGMS1Q86VZ5 419 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 NUP133Q8WUM0 1156 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 TRERF1Q96PN7 1200 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 UNC93B1Q9H1C4 597 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 ACAD9Q9H845 621 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 FBXO40Q9UH90 709 aa15.83■□□□□ 0.12
SOX2-OT-229ENST00000598474 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 SEC24BO95487 1268 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 ZNF792Q3KQV3 632 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 MAML3Q96JK9 1138 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 CENPFP49454 3210 aa15.82■□□□□ 0.12
SOX2-OT-229ENST00000598474 CYTH3O43739 400 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 RXRAP19793 462 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 RPS6KB1P23443 525 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 PSMA5P28066 241 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 CACNB2Q08289 660 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 OLFML2BQ68BL8 750 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 APOA5Q6Q788 366 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 A1CFQ9NQ94 594 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
SOX2-OT-229ENST00000598474 NFIBO00712 420 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 CYP2C19P33261 490 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 USH1GQ495M9 461 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 CCDC144CPQ8IYA2 1237 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 FGD4Q96M96 766 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
SOX2-OT-229ENST00000598474 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 CALM1P0DP23 149 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 CALM2P0DP24 149 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 CALM3P0DP25 149 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 KIF5BP33176 963 aa15.79■□□□□ 0.12
SOX2-OT-229ENST00000598474 CNTN2Q02246 1040 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms