RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 FRMPD2Q68DX3 1309 aaPredicted RBP16.23■□□□□ 0.19
SCAF1-203ENST00000598359 DNAJC25-GNG10A0A024R161 153 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 SLC16A2P36021 539 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 TTC22Q5TAA0 569 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 FAM160B2Q86V87 743 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 ANKRD35Q8N283 1001 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 PRR12Q9ULL5 1215 aa16.23■□□□□ 0.19
SCAF1-203ENST00000598359 DIS3Q9Y2L1 958 aaKnown RBP16.23■□□□□ 0.19
SCAF1-203ENST00000598359 DNM1LO00429 736 aa16.22■□□□□ 0.19
SCAF1-203ENST00000598359 ZNF213O14771 459 aa16.22■□□□□ 0.19
SCAF1-203ENST00000598359 ZNF865P0CJ78 1059 aaPredicted RBP16.22■□□□□ 0.19
SCAF1-203ENST00000598359 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
SCAF1-203ENST00000598359 FGD4Q96M96 766 aa16.22■□□□□ 0.19
SCAF1-203ENST00000598359 GPCPD1Q9NPB8 672 aa16.22■□□□□ 0.19
SCAF1-203ENST00000598359 RNF146Q9NTX7 359 aa16.22■□□□□ 0.19
SCAF1-203ENST00000598359 HIP1O00291 1037 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 SNAI1O95863 264 aaPredicted RBP16.21■□□□□ 0.19
SCAF1-203ENST00000598359 ALAS1P13196 640 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 OAZ1P54368 228 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 CNTN2Q02246 1040 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 LRRC41Q15345 812 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 CHST13Q8NET6 341 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 DCAF4Q8WV16 495 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 TCP11L1Q9NUJ3 509 aa16.21■□□□□ 0.19
SCAF1-203ENST00000598359 DDX49Q9Y6V7 483 aaKnown RBP16.21■□□□□ 0.19
SCAF1-203ENST00000598359 KBTBD13C9JR72 458 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 PLA2G6O60733 806 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 KDM4AO75164 1064 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 PGK1P00558 417 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 MUM1L1Q5H9M0 696 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 DEFB123Q8N688 67 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 ARRDC4Q8NCT1 418 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 FERMT2Q96AC1 680 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 TRERF1Q96PN7 1200 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 COL25A1Q9BXS0 654 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-203ENST00000598359 RNF41Q9H4P4 317 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-203ENST00000598359 ACAD9Q9H845 621 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 XPNPEP3Q9NQH7 507 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 FBXO40Q9UH90 709 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 ZHX1Q9UKY1 873 aaPredicted RBP16.2■□□□□ 0.18
SCAF1-203ENST00000598359 CNPY2Q9Y2B0 182 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
SCAF1-203ENST00000598359 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 VCANP13611 3396 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 B4E1Z4 1266 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 FDX1P10109 184 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 RARBP10826 455 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 ADCYAP1R1P41586 468 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 MAGEA10P43363 369 aaPredicted RBP16.19■□□□□ 0.18
SCAF1-203ENST00000598359 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
SCAF1-203ENST00000598359 ESR2Q92731 530 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 DSCC1Q9BVC3 393 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 A1CFQ9NQ94 594 aaKnown RBP16.19■□□□□ 0.18
SCAF1-203ENST00000598359 NRBP1Q9UHY1 535 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
SCAF1-203ENST00000598359 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 POTEB2H3BUK9 544 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 PDHBP11177 359 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 RTP1P59025 263 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
SCAF1-203ENST00000598359 MAMDC4Q6UXC1 1216 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 PURBQ96QR8 312 aaKnown RBP16.18■□□□□ 0.18
SCAF1-203ENST00000598359 GDF15Q99988 308 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 CPVLQ9H3G5 476 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.18■□□□□ 0.18
SCAF1-203ENST00000598359 ATP11BQ9Y2G3 1177 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 STXBP5LQ9Y2K9 1186 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
SCAF1-203ENST00000598359 ADCY6O43306 1168 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 PCP11498 1178 aaKnown RBP16.17■□□□□ 0.18
SCAF1-203ENST00000598359 AKR1A1P14550 325 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 ACVR2BQ13705 512 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 IMMTQ16891 758 aaKnown RBP16.17■□□□□ 0.18
SCAF1-203ENST00000598359 BTNL9Q6UXG8 535 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 Q7L0L9 218 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 ARMCX2Q7L311 632 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 CCDC144CPQ8IYA2 1237 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 MSL3Q8N5Y2 521 aaKnown RBP16.17■□□□□ 0.18
SCAF1-203ENST00000598359 FAM133AQ8N9E0 248 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 TTC14Q96N46 770 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 RANBP17Q9H2T7 1088 aaKnown RBP16.17■□□□□ 0.18
SCAF1-203ENST00000598359 ASTN1O14525 1302 aa16.17■□□□□ 0.18
SCAF1-203ENST00000598359 ICAM1P05362 532 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 CHMLP26374 656 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
SCAF1-203ENST00000598359 PTH1RQ03431 593 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 TKFCQ3LXA3 575 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 TRIM60Q495X7 471 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 NSMFQ6X4W1 530 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 ZNF467Q7Z7K2 595 aaPredicted RBP16.16■□□□□ 0.18
SCAF1-203ENST00000598359 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 ZSWIM5Q9P217 1185 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
SCAF1-203ENST00000598359 SYNRGQ9UMZ2 1314 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms