RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ANKRD35Q8N283 1001 aa14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 CRBNQ96SW2 442 aa14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 NACAP1Q9BZK3 213 aa14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 MTMR7Q9Y216 660 aa14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 ZNF536O15090 1300 aa14.39□□□□□ -0.11
SOX2-OT-228ENST00000597828 PTGS1P23219 599 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 ACLYP53396 1101 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 RRP1P56182 461 aaKnown RBP14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 CNTN2Q02246 1040 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 PDE4BQ07343 736 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 ZNF697Q5TEC3 545 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 CCSAPQ6IQ19 270 aaPredicted RBP14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 KCTD1Q719H9 257 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 ARMCX2Q7L311 632 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 KLHDC9Q8NEP7 349 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 AGBL1Q96MI9 1066 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 KATNBL1Q9H079 304 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 ZNF287Q9HBT7 754 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 STARD7Q9NQZ5 370 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
SOX2-OT-228ENST00000597828 SCN10AQ9Y5Y9 1956 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 C6orf222P0C671 652 aaPredicted RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 MCCP23508 829 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 STAT2P52630 851 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAAP100Q0VG06 881 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 IKQ13123 557 aaPredicted RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 ACVR2BQ13705 512 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 KCNA10Q16322 511 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 LRRFIP1Q32MZ4 808 aaKnown RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 CCDC144BQ3MJ40 725 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 ZNF467Q7Z7K2 595 aaPredicted RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 CCDC144CPQ8IYA2 1237 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 MSL3Q8N5Y2 521 aaKnown RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 A1CFQ9NQ94 594 aaKnown RBP14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 IL17RBQ9NRM6 502 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 RNF146Q9NTX7 359 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 DOCK5Q9H7D0 1870 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 ASTN1O14525 1302 aa14.37□□□□□ -0.11
SOX2-OT-228ENST00000597828 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 TSPY2A6NKD2 308 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 KIAA0355O15063 1070 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 DUSP11O75319 330 aaKnown RBP14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 SLC3A2P08195 630 aaKnown RBP14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 OAZ1P54368 228 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAM109BQ6ICB4 259 aaPredicted RBP14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 CCDC174Q6PII3 467 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 CHST13Q8NET6 341 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 TTYH1Q9H313 450 aaPredicted RBP14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 ACAD9Q9H845 621 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 STX8Q9UNK0 236 aa14.36□□□□□ -0.11
SOX2-OT-228ENST00000597828 A0A0C4DFX4 3053 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 A0A0D9SFI3 127 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 SOWAHBA6NEL2 793 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 CTAGE5O15320 804 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 ASGR1P07306 291 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 ALAS1P13196 640 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 RAG1P15918 1043 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 SLC1A4P43007 532 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 BEX3Q00994 111 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 MUM1L1Q5H9M0 696 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAM133AQ8N9E0 248 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 GMCL1Q96IK5 515 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 RNPC3Q96LT9 517 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 TSEN34Q9BSV6 310 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 UPF3AQ9H1J1 476 aaKnown RBP14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 ABHD16BQ9H3Z7 469 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 TMEM39AQ9NV64 488 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 FBXO40Q9UH90 709 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 TET1Q8NFU7 2136 aa14.35□□□□□ -0.11
SOX2-OT-228ENST00000597828 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 RANBP6O60518 1105 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 CST5P28325 142 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 TMEM63BQ5T3F8 832 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 ANKRD33Q7Z3H0 272 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 FAM160B2Q86V87 743 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 STAG1Q8WVM7 1258 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 TRERF1Q96PN7 1200 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 CDX2Q99626 313 aaPredicted RBP14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 TBX21Q9UL17 535 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 PRR12Q9ULL5 1215 aa14.34□□□□□ -0.11
SOX2-OT-228ENST00000597828 PDE1AP54750 535 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 GJA9P57773 515 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 FPGSQ05932 587 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 CCDC96Q2M329 555 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 TTBK2Q6IQ55 1244 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 CHURC1Q8WUH1 139 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 NUP133Q8WUM0 1156 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 MYLIPQ8WY64 445 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 GLT1D1Q96MS3 346 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 SEMA6BQ9H3T3 888 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 VCANP13611 3396 aa14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 BAZ2BQ9UIF8 2168 aaKnown RBP14.33□□□□□ -0.12
SOX2-OT-228ENST00000597828 CUL9Q8IWT3 2517 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms