RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PDE4DIPQ5VU43 2346 aa24.73■■□□□ 1.55
PNKP-209ENST00000596726 PGK2P07205 417 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 SNAP25P60880 206 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 GPATCH4Q5T3I0 446 aaKnown RBP24.72■■□□□ 1.55
PNKP-209ENST00000596726 CASC1Q6TDU7 716 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 UBE2Q1Q7Z7E8 422 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 MAML3Q96JK9 1138 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 AGBL1Q96MI9 1066 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 FBXO40Q9UH90 709 aa24.72■■□□□ 1.55
PNKP-209ENST00000596726 DNAJC25-GNG10A0A024R161 153 aa24.71■■□□□ 1.55
PNKP-209ENST00000596726 SLC27A2O14975 620 aa24.71■■□□□ 1.55
PNKP-209ENST00000596726 CCND3P30281 292 aaPredicted RBP24.71■■□□□ 1.55
PNKP-209ENST00000596726 CYP2C19P33261 490 aa24.71■■□□□ 1.55
PNKP-209ENST00000596726 SLC4A3P48751 1232 aa24.71■■□□□ 1.55
PNKP-209ENST00000596726 TKFCQ3LXA3 575 aa24.71■■□□□ 1.55
PNKP-209ENST00000596726 IFIT1BQ5T764 474 aaKnown RBP24.71■■□□□ 1.55
PNKP-209ENST00000596726 RALYLQ86SE5 291 aaKnown RBP24.71■■□□□ 1.55
PNKP-209ENST00000596726 MB21D2Q8IYB1 491 aaPredicted RBP24.71■■□□□ 1.55
PNKP-209ENST00000596726 CREB3L3Q68CJ9 461 aa24.7■■□□□ 1.54
PNKP-209ENST00000596726 CCDC174Q6PII3 467 aa24.7■■□□□ 1.54
PNKP-209ENST00000596726 TFRCP02786 760 aaKnown RBP24.69■■□□□ 1.54
PNKP-209ENST00000596726 ICAM1P05362 532 aa24.69■■□□□ 1.54
PNKP-209ENST00000596726 ANTXR2P58335 489 aa24.69■■□□□ 1.54
PNKP-209ENST00000596726 TRPV1Q8NER1 839 aa24.69■■□□□ 1.54
PNKP-209ENST00000596726 ACAD9Q9H845 621 aa24.69■■□□□ 1.54
PNKP-209ENST00000596726 FRMPD3Q5JV73 1810 aa24.69■■□□□ 1.54
PNKP-209ENST00000596726 GOLGA8HP0CJ92 632 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 CYBAP13498 195 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 ASPRV1Q53RT3 343 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 LHX8Q68G74 356 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 DDX11Q96FC9 970 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 HOMER2Q9NSB8 354 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 RNF146Q9NTX7 359 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 OGDHLQ9ULD0 1010 aa24.68■■□□□ 1.54
PNKP-209ENST00000596726 IFIT3O14879 490 aaKnown RBP24.67■■□□□ 1.54
PNKP-209ENST00000596726 ALAS1P13196 640 aa24.67■■□□□ 1.54
PNKP-209ENST00000596726 CHST3Q7LGC8 479 aa24.67■■□□□ 1.54
PNKP-209ENST00000596726 IGDCC4Q8TDY8 1250 aa24.67■■□□□ 1.54
PNKP-209ENST00000596726 TRERF1Q96PN7 1200 aa24.67■■□□□ 1.54
PNKP-209ENST00000596726 CCPG1Q9ULG6 757 aa24.67■■□□□ 1.54
PNKP-209ENST00000596726 PARP1P09874 1014 aaKnown RBP24.66■■□□□ 1.54
PNKP-209ENST00000596726 ANKRD35Q8N283 1001 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 TINF2Q9BSI4 451 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 MTA3Q9BTC8 594 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 UBA5Q9GZZ9 404 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 CPVLQ9H3G5 476 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 SENP2Q9HC62 589 aa24.66■■□□□ 1.54
PNKP-209ENST00000596726 MYH6P13533 1939 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 ERICH2A1L162 156 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 FARP2O94887 1054 aaPredicted RBP24.65■■□□□ 1.54
PNKP-209ENST00000596726 WTAPQ15007 396 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 SART3Q15020 963 aaKnown RBP24.65■■□□□ 1.54
PNKP-209ENST00000596726 MUM1L1Q5H9M0 696 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 ZNF467Q7Z7K2 595 aaPredicted RBP24.65■■□□□ 1.54
PNKP-209ENST00000596726 MSL3Q8N5Y2 521 aaKnown RBP24.65■■□□□ 1.54
PNKP-209ENST00000596726 ANKLE1Q8NAG6 615 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 A1CFQ9NQ94 594 aaKnown RBP24.65■■□□□ 1.54
PNKP-209ENST00000596726 MCM3APO60318 1980 aa24.65■■□□□ 1.54
PNKP-209ENST00000596726 TAL1P17542 331 aaPredicted RBP24.64■■□□□ 1.54
PNKP-209ENST00000596726 MNX1P50219 401 aaPredicted RBP24.64■■□□□ 1.54
PNKP-209ENST00000596726 COL9A3Q14050 684 aaPredicted RBP24.64■■□□□ 1.54
PNKP-209ENST00000596726 MAMDC4Q6UXC1 1216 aa24.64■■□□□ 1.54
PNKP-209ENST00000596726 FGD4Q96M96 766 aa24.64■■□□□ 1.54
PNKP-209ENST00000596726 DDX20Q9UHI6 824 aaKnown RBP24.64■■□□□ 1.54
PNKP-209ENST00000596726 NRBP1Q9UHY1 535 aa24.64■■□□□ 1.54
PNKP-209ENST00000596726 PNMA2Q9UL42 364 aa24.64■■□□□ 1.54
PNKP-209ENST00000596726 WDR19Q8NEZ3 1342 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 LCTP09848 1927 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 TSGA10IPQ3SY00 556 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 TMEM67Q5HYA8 995 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 PRAMEF19Q5SWL8 479 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 RNF20Q5VTR2 975 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 ADGRF4Q8IZF3 695 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 STAG2Q8N3U4 1231 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 FAM133AQ8N9E0 248 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 MAD2L2Q9UI95 211 aa24.63■■□□□ 1.53
PNKP-209ENST00000596726 PALM3A6NDB9 673 aaPredicted RBP24.62■■□□□ 1.53
PNKP-209ENST00000596726 PRC1O43663 620 aa24.62■■□□□ 1.53
PNKP-209ENST00000596726 MSCO60682 206 aa24.62■■□□□ 1.53
PNKP-209ENST00000596726 MCM5P33992 734 aa24.62■■□□□ 1.53
PNKP-209ENST00000596726 LY9Q9HBG7 655 aa24.62■■□□□ 1.53
PNKP-209ENST00000596726 PFASO15067 1338 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 SYNGAP1Q96PV0 1343 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 SEPT4O43236 478 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 CNGA1P29973 690 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 TROAPQ12815 778 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 GRM4Q14833 912 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 RASEFQ8IZ41 740 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 CLEC4DQ8WXI8 215 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 CYP39A1Q9NYL5 469 aa24.61■■□□□ 1.53
PNKP-209ENST00000596726 POTEB2H3BUK9 544 aa24.6■■□□□ 1.53
PNKP-209ENST00000596726 SNAI1O95863 264 aaPredicted RBP24.6■■□□□ 1.53
PNKP-209ENST00000596726 CNTN2Q02246 1040 aa24.6■■□□□ 1.53
PNKP-209ENST00000596726 CDC37Q16543 378 aaPredicted RBP24.6■■□□□ 1.53
PNKP-209ENST00000596726 DIS3LQ8TF46 1054 aaKnown RBP24.6■■□□□ 1.53
PNKP-209ENST00000596726 PAWRQ96IZ0 340 aaKnown RBP24.6■■□□□ 1.53
PNKP-209ENST00000596726 TMEM87BQ96K49 555 aa24.6■■□□□ 1.53
PNKP-209ENST00000596726 JMJD4Q9H9V9 463 aa24.6■■□□□ 1.53
PNKP-209ENST00000596726 GPHNQ9NQX3 736 aaPredicted RBP24.6■■□□□ 1.53
PNKP-209ENST00000596726 SOWAHBA6NEL2 793 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms