RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 CCDC178Q5BJE1 867 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 OLFML2BQ68BL8 750 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 DPP9Q86TI2 863 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 MB21D2Q8IYB1 491 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 TRPV1Q8NER1 839 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 MAML3Q96JK9 1138 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 RANBP17Q9H2T7 1088 aaKnown RBP12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 SENP2Q9HC62 589 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 HMX1Q9NP08 348 aaPredicted RBP12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 ANO2Q9NQ90 1003 aa12.9□□□□□ -0.34
SHKBP1-206ENST00000595523 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 GOLGA8HP0CJ92 632 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 KCTD2Q14681 263 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 ZNF792Q3KQV3 632 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 SYDE2Q5VT97 1194 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 CCDC174Q6PII3 467 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 CHST3Q7LGC8 479 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 NCOA7Q8NI08 942 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 FGD4Q96M96 766 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 UBAC1Q9BSL1 405 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 CPVLQ9H3G5 476 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 KAT14Q9H8E8 782 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
SHKBP1-206ENST00000595523 ICAM1P05362 532 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 CYBAP13498 195 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 TRDNQ13061 729 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 IFIT1BQ5T764 474 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 MFSD14CQ5VZR4 134 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 CREB3L3Q68CJ9 461 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 LHX8Q68G74 356 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 CHST13Q8NET6 341 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 RNF146Q9NTX7 359 aa12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 CTDP1Q9Y5B0 961 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-206ENST00000595523 RANBP2P49792 3224 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 MUM1L1Q5H9M0 696 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 UBA5Q9GZZ9 404 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 ACAD9Q9H845 621 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 A1CFQ9NQ94 594 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 GPHNQ9NQX3 736 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 FBXO40Q9UH90 709 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 DIS3Q9Y2L1 958 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-206ENST00000595523 IFIT3O14879 490 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 FARP2O94887 1054 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 TFRCP02786 760 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 ALAS1P13196 640 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 CNTN2Q02246 1040 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 SLC35G1Q2M3R5 365 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 TKFCQ3LXA3 575 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 RASEFQ8IZ41 740 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 STAG2Q8N3U4 1231 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 IGDCC4Q8TDY8 1250 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 TRERF1Q96PN7 1200 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 CCPG1Q9ULG6 757 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 ASTN1O14525 1302 aa12.86□□□□□ -0.35
SHKBP1-206ENST00000595523 TROAPQ12815 778 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 ADGRF4Q8IZF3 695 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 ANKRD35Q8N283 1001 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 DDX11Q96FC9 970 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 MAD2L2Q9UI95 211 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 KIAA1217Q5T5P2 1943 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 WDR19Q8NEZ3 1342 aa12.85□□□□□ -0.35
SHKBP1-206ENST00000595523 PALM3A6NDB9 673 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 NFIBO00712 420 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 PRC1O43663 620 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 PARP1P09874 1014 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 GRM4Q14833 912 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 WTAPQ15007 396 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 ADCK5Q3MIX3 580 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 TMEM67Q5HYA8 995 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 MAMDC4Q6UXC1 1216 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 CLEC4DQ8WXI8 215 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 CYP39A1Q9NYL5 469 aa12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 DDX20Q9UHI6 824 aaKnown RBP12.84□□□□□ -0.35
SHKBP1-206ENST00000595523 SOWAHBA6NEL2 793 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 SEPT4O43236 478 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 ZNF865P0CJ78 1059 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 CAPN2P17655 700 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 CNGA1P29973 690 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 MCM5P33992 734 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 SART3Q15020 963 aaKnown RBP12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 CDC37Q16543 378 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 ZNF467Q7Z7K2 595 aaPredicted RBP12.83□□□□□ -0.36
SHKBP1-206ENST00000595523 ANKLE1Q8NAG6 615 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms