RNA–Protein interactions for RNA: ENST00000595045.1

NOTCH3-202, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 558 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-202ENST00000595045 CTAGE5O15320 804 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 SMARCA5O60264 1052 aaPredicted RBP11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 DUSP11O75319 330 aaKnown RBP11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 CST5P28325 142 aaPredicted RBP11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 CYP2C18P33260 490 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 KCNQ1P51787 676 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 SBK1Q52WX2 424 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 C20orf194Q5TEA3 1177 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 FAM126BQ8IXS8 530 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 MICALL1Q8N3F8 863 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 OSBP2Q969R2 916 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 VTI1AQ96AJ9 217 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 EPHX3Q9H6B9 360 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 SH2D4AQ9H788 454 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 EPB41L4AQ9HCS5 686 aaPredicted RBP11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 HCN4Q9Y3Q4 1203 aa11.68□□□□□ -0.54
NOTCH3-202ENST00000595045 A0A0U1RQG5 324 aaPredicted RBP11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 ATP2A1O14983 1001 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 NDUFB10O96000 172 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 ASGR1P07306 291 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 C6orf222P0C671 652 aaPredicted RBP11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 RABGGTBP53611 331 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 AAK1Q2M2I8 961 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 MSL3Q8N5Y2 521 aaKnown RBP11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 KATNBL1Q9H079 304 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 NYAP2Q9P242 653 aa11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 ZHX1Q9UKY1 873 aaPredicted RBP11.67□□□□□ -0.54
NOTCH3-202ENST00000595045 TRIOO75962 3097 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 F5H6K3 240 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 ERC2O15083 957 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 CD4P01730 458 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 FGBP02675 491 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 MYOGP15173 224 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 COPB2P35606 906 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 KLRC3Q07444 240 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 PPP2R2DQ66LE6 453 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 OTOP2Q7RTS6 562 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 PCSK9Q8NBP7 692 aaKnown RBP11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 MKL1Q969V6 931 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 SLF1Q9BQI6 1058 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 BCL11AQ9H165 835 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 UPF3AQ9H1J1 476 aaKnown RBP11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 MTIF3Q9H2K0 278 aaKnown RBP11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 DDX19BQ9UMR2 479 aa11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 BAZ2AQ9UIF9 1905 aaKnown RBP11.66□□□□□ -0.54
NOTCH3-202ENST00000595045 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 TLR3O15455 904 aaKnown RBP11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 HMMRO75330 724 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 GJA9P57773 515 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 NKX3-2P78367 333 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 SKIV2LQ15477 1246 aaKnown RBP11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 GNASQ5JWF2 1037 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 TSHZ3Q63HK5 1081 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 TEX13BQ9BXU2 312 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 SPC25Q9HBM1 224 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 SLC38A10Q9HBR0 1119 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 GOPCQ9HD26 462 aa11.65□□□□□ -0.54
NOTCH3-202ENST00000595045 ASTN1O14525 1302 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 LRRC37A2A6NM11 1700 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 FOXP2O15409 715 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 PTGS1P23219 599 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 ACVR2BQ13705 512 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 CCDC144BQ3MJ40 725 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 SNRNP48Q6IEG0 339 aaKnown RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 STK11IPQ8N1F8 1099 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 DDX11Q96FC9 970 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 HIPK3Q9H422 1215 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 RAVER2Q9HCJ3 691 aaKnown RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 MTMR4Q9NYA4 1195 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 ARPP21Q9UBL0 812 aaPredicted RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 CLIP2Q9UDT6 1046 aa11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 DDX49Q9Y6V7 483 aaKnown RBP11.64□□□□□ -0.55
NOTCH3-202ENST00000595045 ZNF536O15090 1300 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 M0R2C6 588 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 RFXAPO00287 272 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 PRDM1O75626 825 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 CCL23P55773 120 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 KBTBD3Q8NAB2 608 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 PRPF38AQ8NAV1 312 aaKnown RBP11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 SLC43A3Q8NBI5 491 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 CEP95Q96GE4 821 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 LRRCC1Q9C099 1032 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 C11orf16Q9NQ32 467 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 ECHDC1Q9NTX5 307 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 PCDHA11Q9Y5I1 949 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 MTCH2Q9Y6C9 303 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 SLC4A7Q9Y6M7 1214 aa11.63□□□□□ -0.55
NOTCH3-202ENST00000595045 GRIN2DO15399 1336 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 RNF113AO15541 343 aaKnown RBP11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 TLL1O43897 1013 aa11.62□□□□□ -0.55
NOTCH3-202ENST00000595045 GPR37L1O60883 481 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms