RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.63■■□□□ 1.69
HOMER3-206ENST00000594439 GPHNQ9NQX3 736 aaPredicted RBP25.63■■□□□ 1.69
HOMER3-206ENST00000594439 PLXNA1Q9UIW2 1896 aa25.63■■□□□ 1.69
HOMER3-206ENST00000594439 CENPFP49454 3210 aa25.63■■□□□ 1.69
HOMER3-206ENST00000594439 IGHA2P01877 340 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 PARP1P09874 1014 aaKnown RBP25.62■■□□□ 1.69
HOMER3-206ENST00000594439 HSPA4P34932 840 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 MAP3K21Q5TCX8 1036 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 CHST13Q8NET6 341 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 UBA5Q9GZZ9 404 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 RNF208Q9H0X6 261 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 CPVLQ9H3G5 476 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 LY9Q9HBG7 655 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 FBXO40Q9UH90 709 aa25.62■■□□□ 1.69
HOMER3-206ENST00000594439 ICAM1P05362 532 aa25.61■■□□□ 1.69
HOMER3-206ENST00000594439 TKFCQ3LXA3 575 aa25.61■■□□□ 1.69
HOMER3-206ENST00000594439 ADCK5Q3MIX3 580 aa25.61■■□□□ 1.69
HOMER3-206ENST00000594439 TMEM87BQ96K49 555 aa25.61■■□□□ 1.69
HOMER3-206ENST00000594439 NEK1Q96PY6 1258 aa25.61■■□□□ 1.69
HOMER3-206ENST00000594439 SH2B2O14492 632 aaPredicted RBP25.6■■□□□ 1.69
HOMER3-206ENST00000594439 PGK2P07205 417 aa25.6■■□□□ 1.69
HOMER3-206ENST00000594439 TROAPQ12815 778 aa25.6■■□□□ 1.69
HOMER3-206ENST00000594439 STAG2Q8N3U4 1231 aa25.6■■□□□ 1.69
HOMER3-206ENST00000594439 RNF146Q9NTX7 359 aa25.6■■□□□ 1.69
HOMER3-206ENST00000594439 SLC5A4Q9NY91 659 aa25.6■■□□□ 1.69
HOMER3-206ENST00000594439 EPB41L2O43491 1005 aaKnown RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 GJB1P08034 283 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 ALAS1P13196 640 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 PRKAR2AP13861 404 aaKnown RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 TAL1P17542 331 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 EN2P19622 333 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 CACNB2Q08289 660 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 KRT32Q14532 448 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 GRM4Q14833 912 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 ZNF792Q3KQV3 632 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 OLFML2BQ68BL8 750 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 TRERF1Q96PN7 1200 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 ACAD9Q9H845 621 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 PAK6Q9NQU5 681 aaPredicted RBP25.59■■□□□ 1.69
HOMER3-206ENST00000594439 HOMER2Q9NSB8 354 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 MAD2L2Q9UI95 211 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 CCPG1Q9ULG6 757 aa25.59■■□□□ 1.69
HOMER3-206ENST00000594439 DNAJC25-GNG10A0A024R161 153 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 PALM3A6NDB9 673 aaPredicted RBP25.58■■□□□ 1.69
HOMER3-206ENST00000594439 MFSD14CQ5VZR4 134 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 ADGRF4Q8IZF3 695 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 MAML3Q96JK9 1138 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 SNX14Q9Y5W7 946 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 RPTORQ8N122 1335 aa25.58■■□□□ 1.69
HOMER3-206ENST00000594439 EXOSC10Q01780 885 aaKnown RBP25.57■■□□□ 1.68
HOMER3-206ENST00000594439 CATIPQ7Z7H3 387 aa25.57■■□□□ 1.68
HOMER3-206ENST00000594439 DDX11Q96FC9 970 aa25.57■■□□□ 1.68
HOMER3-206ENST00000594439 LRRC2Q9BYS8 371 aa25.57■■□□□ 1.68
HOMER3-206ENST00000594439 HMX1Q9NP08 348 aaPredicted RBP25.57■■□□□ 1.68
HOMER3-206ENST00000594439 DIS3Q9Y2L1 958 aaKnown RBP25.57■■□□□ 1.68
HOMER3-206ENST00000594439 WDR19Q8NEZ3 1342 aa25.57■■□□□ 1.68
HOMER3-206ENST00000594439 KLRF2D3W0D1 207 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 CYP2C19P33261 490 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 LIFRP42702 1097 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 GJA8P48165 433 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 MUM1L1Q5H9M0 696 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 DHX32Q7L7V1 743 aaKnown RBP25.56■■□□□ 1.68
HOMER3-206ENST00000594439 ZNF654Q8IZM8 581 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 ANKRD35Q8N283 1001 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 TMTC2Q8N394 836 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 SHISA4Q96DD7 197 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 USP26Q9BXU7 913 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 JMJD4Q9H9V9 463 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 MYH6P13533 1939 aa25.56■■□□□ 1.68
HOMER3-206ENST00000594439 U2AF1L4Q8WU68 220 aaKnown RBP25.55■■□□□ 1.68
HOMER3-206ENST00000594439 DEFB118Q96PH6 123 aa25.55■■□□□ 1.68
HOMER3-206ENST00000594439 A1CFQ9NQ94 594 aaKnown RBP25.55■■□□□ 1.68
HOMER3-206ENST00000594439 PNMA2Q9UL42 364 aa25.55■■□□□ 1.68
HOMER3-206ENST00000594439 DDAH1O94760 285 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 CCND3P30281 292 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-206ENST00000594439 CDC37Q16543 378 aaPredicted RBP25.54■■□□□ 1.68
HOMER3-206ENST00000594439 SLC35G1Q2M3R5 365 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 TCEANC2Q96MN5 208 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 MAP3K14Q99558 947 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 MYL10Q9BUA6 226 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 VAT1LQ9HCJ6 419 aa25.54■■□□□ 1.68
HOMER3-206ENST00000594439 CCDC69A6NI79 296 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 SGPL1O95470 568 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 NFXL1Q6ZNB6 911 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 SGMS1Q86VZ5 419 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 TRPV1Q8NER1 839 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 NUP133Q8WUM0 1156 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 FGD4Q96M96 766 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 LCTP09848 1927 aa25.53■■□□□ 1.68
HOMER3-206ENST00000594439 DHX16O60231 1041 aaKnown RBP25.52■■□□□ 1.68
HOMER3-206ENST00000594439 HMGB1P09429 215 aaKnown RBP25.52■■□□□ 1.68
HOMER3-206ENST00000594439 QRICH1Q2TAL8 776 aa25.52■■□□□ 1.68
HOMER3-206ENST00000594439 CLEC4DQ8WXI8 215 aa25.52■■□□□ 1.68
HOMER3-206ENST00000594439 MTMR8Q96EF0 704 aa25.52■■□□□ 1.68
HOMER3-206ENST00000594439 JAKMIP1Q96N16 626 aaKnown RBP25.52■■□□□ 1.68
HOMER3-206ENST00000594439 TINF2Q9BSI4 451 aa25.52■■□□□ 1.68
HOMER3-206ENST00000594439 CRISPLD2Q9H0B8 497 aa25.52■■□□□ 1.68
HOMER3-206ENST00000594439 BAZ2BQ9UIF8 2168 aaKnown RBP25.52■■□□□ 1.68
HOMER3-206ENST00000594439 CYBAP13498 195 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms