RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 MMP19Q99542 508 aa19.93■□□□□ 0.78
LTBP4-209ENST00000594116 SLF1Q9BQI6 1058 aa19.93■□□□□ 0.78
LTBP4-209ENST00000594116 NRBP1Q9UHY1 535 aa19.93■□□□□ 0.78
LTBP4-209ENST00000594116 TSPY2A6NKD2 308 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 RANBP6O60518 1105 aaKnown RBP19.92■□□□□ 0.78
LTBP4-209ENST00000594116 NDUFB10O96000 172 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 HMGB1P09429 215 aaKnown RBP19.92■□□□□ 0.78
LTBP4-209ENST00000594116 TFAP4Q01664 338 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 KCTD2Q14681 263 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 CYB5R4Q7L1T6 521 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 MKL1Q969V6 931 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 NUP88Q99567 741 aaPredicted RBP19.92■□□□□ 0.78
LTBP4-209ENST00000594116 ZSWIM6Q9HCJ5 1215 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 ZSWIM5Q9P217 1185 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 DIS3Q9Y2L1 958 aaKnown RBP19.92■□□□□ 0.78
LTBP4-209ENST00000594116 WDR19Q8NEZ3 1342 aa19.92■□□□□ 0.78
LTBP4-209ENST00000594116 TSPY3P0CV98 308 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 TSPY8P0CW00 308 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 ANTXR2P58335 489 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 FAM47AQ5JRC9 791 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 TDHQ8IZJ6 230 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 PRPF38AQ8NAV1 312 aaKnown RBP19.91■□□□□ 0.78
LTBP4-209ENST00000594116 CEP95Q96GE4 821 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 MTA3Q9BTC8 594 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 TEX13BQ9BXU2 312 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 TCP11L1Q9NUJ3 509 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 MTMR4Q9NYA4 1195 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 CLIP2Q9UDT6 1046 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 SMCHD1A6NHR9 2005 aa19.91■□□□□ 0.78
LTBP4-209ENST00000594116 KBTBD13C9JR72 458 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 CASTP20810 708 aaKnown RBP19.9■□□□□ 0.78
LTBP4-209ENST00000594116 MCM5P33992 734 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 NOVP48745 357 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 EXOSC10Q01780 885 aaKnown RBP19.9■□□□□ 0.78
LTBP4-209ENST00000594116 ZNF792Q3KQV3 632 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 LRIT3Q3SXY7 679 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 GJC2Q5T442 439 aaPredicted RBP19.9■□□□□ 0.78
LTBP4-209ENST00000594116 BLOC1S2Q6QNY1 142 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 DHX32Q7L7V1 743 aaKnown RBP19.9■□□□□ 0.78
LTBP4-209ENST00000594116 LRCH3Q96II8 777 aa19.9■□□□□ 0.78
LTBP4-209ENST00000594116 ATP2A1O14983 1001 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 TTLL1O95922 423 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 PGK2P07205 417 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 RPS6KB1P23443 525 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 LTBP2Q14767 1821 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 PRAMEF19Q5SWL8 479 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 GPR153Q6NV75 609 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 RUFY3Q7L099 469 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 GMCL1P1Q8NEA9 526 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 TINF2Q9BSI4 451 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 UBE2OQ9C0C9 1292 aaKnown RBP19.89■□□□□ 0.77
LTBP4-209ENST00000594116 IL17RBQ9NRM6 502 aa19.89■□□□□ 0.77
LTBP4-209ENST00000594116 PRC1O43663 620 aa19.88■□□□□ 0.77
LTBP4-209ENST00000594116 CPA1P15085 419 aa19.88■□□□□ 0.77
LTBP4-209ENST00000594116 ATN1P54259 1190 aaPredicted RBP19.88■□□□□ 0.77
LTBP4-209ENST00000594116 ANO1Q5XXA6 986 aa19.88■□□□□ 0.77
LTBP4-209ENST00000594116 SNRNP48Q6IEG0 339 aaKnown RBP19.88■□□□□ 0.77
LTBP4-209ENST00000594116 IQCA1Q86XH1 822 aa19.88■□□□□ 0.77
LTBP4-209ENST00000594116 RTP1P59025 263 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 LRRC41Q15345 812 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 SEC23AQ15436 765 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 CCDC178Q5BJE1 867 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.87■□□□□ 0.77
LTBP4-209ENST00000594116 MSL3Q8N5Y2 521 aaKnown RBP19.87■□□□□ 0.77
LTBP4-209ENST00000594116 TMEM87BQ96K49 555 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 ZSCAN10Q96SZ4 725 aaPredicted RBP19.87■□□□□ 0.77
LTBP4-209ENST00000594116 UPF3BQ9BZI7 483 aaKnown RBP19.87■□□□□ 0.77
LTBP4-209ENST00000594116 FEM1BQ9UK73 627 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 CYP46A1Q9Y6A2 500 aa19.87■□□□□ 0.77
LTBP4-209ENST00000594116 TNKSO95271 1327 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 NMT2O60551 498 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 ZBED4O75132 1171 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 SNX17Q15036 470 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 RABEP1Q15276 862 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 PPP4R3BQ5MIZ7 849 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 SLC39A5Q6ZMH5 540 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 CHST3Q7LGC8 479 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 LRRC47Q8N1G4 583 aaKnown RBP19.86■□□□□ 0.77
LTBP4-209ENST00000594116 FBXL16Q8N461 479 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 IL27Q8NEV9 243 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 ANKS1AQ92625 1134 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 ZKSCAN3Q9BRR0 538 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 UBAC1Q9BSL1 405 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 SLC38A10Q9HBR0 1119 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 RIPK3Q9Y572 518 aa19.86■□□□□ 0.77
LTBP4-209ENST00000594116 DNAJC25-GNG10A0A024R161 153 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 SH2B2O14492 632 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-209ENST00000594116 RARBP10826 455 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 OAZ1P54368 228 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 MDM2Q00987 491 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-209ENST00000594116 RCSD1Q6JBY9 416 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 DGKHQ86XP1 1220 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 ENAHQ8N8S7 591 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-209ENST00000594116 IGDCC4Q8TDY8 1250 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 KIFC2Q96AC6 838 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 TCEANC2Q96MN5 208 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 TTC14Q96N46 770 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
LTBP4-209ENST00000594116 ALDH8A1Q9H2A2 487 aaPredicted RBP19.85■□□□□ 0.77
LTBP4-209ENST00000594116 XPNPEP3Q9NQH7 507 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms