RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 TTYH1Q9H313 450 aaPredicted RBP17.53■□□□□ 0.4
PNKP-202ENST00000593706 ABHD16BQ9H3Z7 469 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
PNKP-202ENST00000593706 MTMR4Q9NYA4 1195 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 SYNPO2Q9UMS6 1093 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 MYH6P13533 1939 aa17.53■□□□□ 0.4
PNKP-202ENST00000593706 MUC3AQ02505 3323 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 CHD9Q3L8U1 2897 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 MYADML2A6NDP7 307 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 SLC3A2P08195 630 aaKnown RBP17.52■□□□□ 0.4
PNKP-202ENST00000593706 BMP3P12645 472 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 OAZ1P54368 228 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 EPHB4P54760 987 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 FAAP100Q0VG06 881 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 IFNL3Q8IZI9 196 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 PCSK9Q8NBP7 692 aaKnown RBP17.52■□□□□ 0.4
PNKP-202ENST00000593706 KLHDC9Q8NEP7 349 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 CHST13Q8NET6 341 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 VTI1AQ96AJ9 217 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 FSD1Q9BTV5 496 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 NAPBQ9H115 298 aa17.52■□□□□ 0.4
PNKP-202ENST00000593706 TTC28Q96AY4 2481 aa17.52■□□□□ 0.39
PNKP-202ENST00000593706 SALL3Q9BXA9 1300 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 PATL2C9JE40 543 aaKnown RBP17.51■□□□□ 0.39
PNKP-202ENST00000593706 ERC2O15083 957 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 STAT2P52630 851 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
PNKP-202ENST00000593706 SLFN13Q68D06 897 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 ARMCX2Q7L311 632 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 MKL1Q969V6 931 aa17.51■□□□□ 0.39
PNKP-202ENST00000593706 ELP1O95163 1332 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 TMEM265A0A087WTH1 108 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 ADCY6O43306 1168 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 ASGR1P07306 291 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
PNKP-202ENST00000593706 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.5■□□□□ 0.39
PNKP-202ENST00000593706 CCDC144CPQ8IYA2 1237 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 OTUD7AQ8TE49 926 aaPredicted RBP17.5■□□□□ 0.39
PNKP-202ENST00000593706 CHMP4CQ96CF2 233 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 SEC62Q99442 399 aaKnown RBP17.5■□□□□ 0.39
PNKP-202ENST00000593706 ACAD9Q9H845 621 aa17.5■□□□□ 0.39
PNKP-202ENST00000593706 A0A0U1RQG5 324 aaPredicted RBP17.49■□□□□ 0.39
PNKP-202ENST00000593706 TIMP1P01033 207 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 FDX1P10109 184 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 IRX5P78411 483 aaPredicted RBP17.49■□□□□ 0.39
PNKP-202ENST00000593706 TFAP4Q01664 338 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 PPARAQ07869 468 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 GNASQ5JWF2 1037 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 CCSAPQ6IQ19 270 aaPredicted RBP17.49■□□□□ 0.39
PNKP-202ENST00000593706 NEDD1Q8NHV4 660 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 PI4K2BQ8TCG2 481 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 FGD4Q96M96 766 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 RNF146Q9NTX7 359 aa17.49■□□□□ 0.39
PNKP-202ENST00000593706 TLR3O15455 904 aaKnown RBP17.48■□□□□ 0.39
PNKP-202ENST00000593706 DNAJB2P25686 324 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 SLC1A4P43007 532 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 GJA9P57773 515 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 CNTN2Q02246 1040 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 AAMPQ13685 434 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 CCDC174Q6PII3 467 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 NOL8Q76FK4 1167 aaKnown RBP17.48■□□□□ 0.39
PNKP-202ENST00000593706 FAM160B2Q86V87 743 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 CHURC1Q8WUH1 139 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 UPF3AQ9H1J1 476 aaKnown RBP17.48■□□□□ 0.39
PNKP-202ENST00000593706 TBX21Q9UL17 535 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 STX8Q9UNK0 236 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 CHD7Q9P2D1 2997 aa17.48■□□□□ 0.39
PNKP-202ENST00000593706 LAMA4Q16363 1823 aa17.47■□□□□ 0.39
PNKP-202ENST00000593706 REV3LO60673 3130 aa17.47■□□□□ 0.39
PNKP-202ENST00000593706 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.47■□□□□ 0.39
PNKP-202ENST00000593706 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.47■□□□□ 0.39
PNKP-202ENST00000593706 PPIGQ13427 754 aaKnown RBP eCLIP17.47■□□□□ 0.392e-7■■■■□ 22.6
PNKP-202ENST00000593706 PPP4R3BQ5MIZ7 849 aa17.47■□□□□ 0.39
PNKP-202ENST00000593706 MFSD5Q6N075 450 aa17.47■□□□□ 0.39
PNKP-202ENST00000593706 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.47■□□□□ 0.393e-9■■■□□ 18.5
PNKP-202ENST00000593706 PPP1R12CQ9BZL4 782 aa17.47■□□□□ 0.39
PNKP-202ENST00000593706 TSPY2A6NKD2 308 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 ARVCFO00192 962 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 ALAS1P13196 640 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 MCCP23508 829 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 TNFAIP2Q03169 654 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 ZMYM1Q5SVZ6 1142 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 TMEM199Q8N511 208 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 FAM133AQ8N9E0 248 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 GMCL1Q96IK5 515 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 AGBL1Q96MI9 1066 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 A1CFQ9NQ94 594 aaKnown RBP17.46■□□□□ 0.39
PNKP-202ENST00000593706 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 SCN5AQ14524 2016 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 TRANK1O15050 2925 aa17.46■□□□□ 0.39
PNKP-202ENST00000593706 TANC1Q9C0D5 1861 aa17.46■□□□□ 0.38
PNKP-202ENST00000593706 ASB14A6NK59 587 aa17.45■□□□□ 0.38
PNKP-202ENST00000593706 MX1P20591 662 aa17.45■□□□□ 0.38
PNKP-202ENST00000593706 BEX3Q00994 111 aa17.45■□□□□ 0.38
PNKP-202ENST00000593706 TKFCQ3LXA3 575 aa17.45■□□□□ 0.38
PNKP-202ENST00000593706 CCDC129Q6ZRS4 1044 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms