RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 TSPY8P0CW00 308 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 BMP3P12645 472 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 CNTN2Q02246 1040 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
RETREG3-212ENST00000593251 GMCL1P1Q8NEA9 526 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 CHST13Q8NET6 341 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 VTI1AQ96AJ9 217 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 ABHD16BQ9H3Z7 469 aa20.81■□□□□ 0.92
RETREG3-212ENST00000593251 VCANP13611 3396 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 TMEM232C9JQI7 657 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 FOSL2P15408 326 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 TFAP4Q01664 338 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 CCDC144CPQ8IYA2 1237 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 NEDD1Q8NHV4 660 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 GLT1D1Q96MS3 346 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 FBXO40Q9UH90 709 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 TBX21Q9UL17 535 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 PLIN4Q96Q06 1357 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 LCTP09848 1927 aa20.8■□□□□ 0.92
RETREG3-212ENST00000593251 TIMP1P01033 207 aa20.79■□□□□ 0.92
RETREG3-212ENST00000593251 CST5P28325 142 aaPredicted RBP20.79■□□□□ 0.92
RETREG3-212ENST00000593251 PDE4BQ07343 736 aa20.79■□□□□ 0.92
RETREG3-212ENST00000593251 GNASQ5JWF2 1037 aa20.79■□□□□ 0.92
RETREG3-212ENST00000593251 PCSK9Q8NBP7 692 aaKnown RBP20.79■□□□□ 0.92
RETREG3-212ENST00000593251 OTUD7AQ8TE49 926 aaPredicted RBP20.79■□□□□ 0.92
RETREG3-212ENST00000593251 AGBL1Q96MI9 1066 aa20.79■□□□□ 0.92
RETREG3-212ENST00000593251 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.79■□□□□ 0.927e-6■■□□□ 11.5
RETREG3-212ENST00000593251 UPF3AQ9H1J1 476 aaKnown RBP20.79■□□□□ 0.92
RETREG3-212ENST00000593251 GBF1Q92538 1859 aa20.79■□□□□ 0.92
RETREG3-212ENST00000593251 ELP1O95163 1332 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 CDK7P50613 346 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 OAZ1P54368 228 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 GJA9P57773 515 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 PPARAQ07869 468 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 IKQ13123 557 aaPredicted RBP20.78■□□□□ 0.92
RETREG3-212ENST00000593251 PI4K2BQ8TCG2 481 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 FSD1Q9BTV5 496 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 NACAP1Q9BZK3 213 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 KATNBL1Q9H079 304 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 NAPBQ9H115 298 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 SPC25Q9HBM1 224 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 SYNPO2Q9UMS6 1093 aa20.78■□□□□ 0.92
RETREG3-212ENST00000593251 DDX49Q9Y6V7 483 aaKnown RBP20.78■□□□□ 0.92
RETREG3-212ENST00000593251 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.77■□□□□ 0.92
RETREG3-212ENST00000593251 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.77■□□□□ 0.92
RETREG3-212ENST00000593251 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.77■□□□□ 0.92
RETREG3-212ENST00000593251 MCCP23508 829 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 DNAJB2P25686 324 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 STAT2P52630 851 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 SNAP25P60880 206 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 BEX3Q00994 111 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 RASGRP2Q7LDG7 609 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 PPP1R12CQ9BZL4 782 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 ACAD9Q9H845 621 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 INCENPQ9NQS7 918 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 RNF146Q9NTX7 359 aa20.77■□□□□ 0.92
RETREG3-212ENST00000593251 ZNF536O15090 1300 aa20.77■□□□□ 0.91
RETREG3-212ENST00000593251 MROH7Q68CQ1 1323 aa20.77■□□□□ 0.91
RETREG3-212ENST00000593251 TTC41PQ6P2S7 1318 aa20.77■□□□□ 0.91
RETREG3-212ENST00000593251 A0A0U1RQG5 324 aaPredicted RBP20.76■□□□□ 0.91
RETREG3-212ENST00000593251 ARVCFO00192 962 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 CTAGE5O15320 804 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 CTDSPL2Q05D32 466 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 GRIN2CQ14957 1233 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 LRRFIP1Q32MZ4 808 aaKnown RBP20.76■□□□□ 0.91
RETREG3-212ENST00000593251 ZMYM1Q5SVZ6 1142 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 MFSD5Q6N075 450 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 CCDC129Q6ZRS4 1044 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 KCTD1Q719H9 257 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 C16orf59Q7L2K0 433 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 FAM133AQ8N9E0 248 aa20.76■□□□□ 0.91
RETREG3-212ENST00000593251 A1CFQ9NQ94 594 aaKnown RBP20.76■□□□□ 0.91
RETREG3-212ENST00000593251 TMEM265A0A087WTH1 108 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 SOWAHBA6NEL2 793 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 NMT2O60551 498 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 SLC3A2P08195 630 aaKnown RBP20.75■□□□□ 0.91
RETREG3-212ENST00000593251 ACRP10323 421 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 ALAS1P13196 640 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 PTGS1P23219 599 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 SLC1A4P43007 532 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 CCDC174Q6PII3 467 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 NOL8Q76FK4 1167 aaKnown RBP20.75■□□□□ 0.91
RETREG3-212ENST00000593251 CHURC1Q8WUH1 139 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 STAG1Q8WVM7 1258 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 MTMR7Q9Y216 660 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 ASTN1O14525 1302 aa20.75■□□□□ 0.91
RETREG3-212ENST00000593251 GRXCR1A8MXD5 290 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 ERC2O15083 957 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 FDX1P10109 184 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 CSF2RAP15509 400 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 TNFAIP2Q03169 654 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 PPIGQ13427 754 aaKnown RBP eCLIP20.74■□□□□ 0.911e-12■□□□□ 8.7
RETREG3-212ENST00000593251 TMEM240Q5SV17 173 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 FAM160B2Q86V87 743 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 GMCL1Q96IK5 515 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 TRERF1Q96PN7 1200 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 STX8Q9UNK0 236 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 PCDHB15Q9Y5E8 787 aa20.74■□□□□ 0.91
RETREG3-212ENST00000593251 FOXP2O15409 715 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms