RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 NUCB1Q02818 461 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 LRIT3Q3SXY7 679 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 TRIM60Q495X7 471 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.01■□□□□ 0.63
CIRBP-240ENST00000592815 PLEKHM2Q8IWE5 1019 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 ZHX1Q9UKY1 873 aaPredicted RBP19.01■□□□□ 0.63
CIRBP-240ENST00000592815 FRMPD3Q5JV73 1810 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 MYH4Q9Y623 1939 aa19.01■□□□□ 0.63
CIRBP-240ENST00000592815 SMCHD1A6NHR9 2005 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 LAMA3Q16787 3333 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 SDSP20132 328 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 HAND2P61296 217 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 ACVR2BQ13705 512 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 SNX17Q15036 470 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 CCDC174Q6PII3 467 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 ACAD9Q9H845 621 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 PRDM5Q9NQX1 630 aaPredicted RBP19■□□□□ 0.63
CIRBP-240ENST00000592815 RNF146Q9NTX7 359 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 CDKN2AIPQ9NXV6 580 aaPredicted RBP19■□□□□ 0.63
CIRBP-240ENST00000592815 PRR12Q9ULL5 1215 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 ZNF536O15090 1300 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
CIRBP-240ENST00000592815 POTEB2H3BUK9 544 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 ALAS1P13196 640 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 NOVP48745 357 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 CNTN2Q02246 1040 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 CCDC96Q2M329 555 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 RASGRP2Q7LDG7 609 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 FGD4Q96M96 766 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 TRERF1Q96PN7 1200 aa18.99■□□□□ 0.63
CIRBP-240ENST00000592815 ADAMTS4O75173 837 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 TOP1P11387 765 aaKnown RBP18.98■□□□□ 0.63
CIRBP-240ENST00000592815 TLE2Q04725 743 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 TKFCQ3LXA3 575 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 C1orf53Q5VUE5 145 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 MFSD6Q6ZSS7 791 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 ARMCX2Q7L311 632 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 DCAF4Q8WV16 495 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 TMEM47Q9BQJ4 181 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 ABHD16BQ9H3Z7 469 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 OSBPL3Q9H4L5 887 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 A1CFQ9NQ94 594 aaKnown RBP18.98■□□□□ 0.63
CIRBP-240ENST00000592815 TCP11L1Q9NUJ3 509 aa18.98■□□□□ 0.63
CIRBP-240ENST00000592815 A0A1W2PQ45 241 aaPredicted RBP18.97■□□□□ 0.63
CIRBP-240ENST00000592815 A0A1W2PQY0 241 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 DUSP11O75319 330 aaKnown RBP18.97■□□□□ 0.63
CIRBP-240ENST00000592815 SLC16A2P36021 539 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 MFAP1P55081 439 aaKnown RBP18.97■□□□□ 0.63
CIRBP-240ENST00000592815 CCDC144BQ3MJ40 725 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 TTBK2Q6IQ55 1244 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 CCDC144CPQ8IYA2 1237 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 TSEN34Q9BSV6 310 aaKnown RBP18.97■□□□□ 0.63
CIRBP-240ENST00000592815 ZMYM6O95789 1325 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 SYNRGQ9UMZ2 1314 aa18.97■□□□□ 0.63
CIRBP-240ENST00000592815 TRIM43BA6NCK2 446 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 ACLYP53396 1101 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 KCNA10Q16322 511 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 AKNAD1Q5T1N1 836 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 GPR153Q6NV75 609 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 KLHDC9Q8NEP7 349 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 BADQ92934 168 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 TRIM43Q96BQ3 446 aaPredicted RBP18.96■□□□□ 0.63
CIRBP-240ENST00000592815 GPCPD1Q9NPB8 672 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 PDLIM7Q9NR12 457 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 PLXNA1Q9UIW2 1896 aa18.96■□□□□ 0.63
CIRBP-240ENST00000592815 SOWAHBA6NEL2 793 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 MUM1L1Q5H9M0 696 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 CWC27Q6UX04 472 aaKnown RBP18.95■□□□□ 0.62
CIRBP-240ENST00000592815 TBC1D10CQ8IV04 446 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 DEFB123Q8N688 67 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 DIAPH3Q9NSV4 1193 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 CCPG1Q9ULG6 757 aa18.95■□□□□ 0.62
CIRBP-240ENST00000592815 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
CIRBP-240ENST00000592815 FRMPD2Q68DX3 1309 aaPredicted RBP18.95■□□□□ 0.62
CIRBP-240ENST00000592815 MYADML2A6NDP7 307 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 ZNF213O14771 459 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 ADCY6O43306 1168 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 PQBP1O60828 265 aaKnown RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 ICAM1P05362 532 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 C6orf222P0C671 652 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 PCP11498 1178 aaKnown RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 IRX5P78411 483 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 CCSAPQ6IQ19 270 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 BTNL9Q6UXG8 535 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 Q7L0L9 218 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 NUP133Q8WUM0 1156 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 TTC14Q96N46 770 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 RNF41Q9H4P4 317 aaPredicted RBP18.94■□□□□ 0.62
CIRBP-240ENST00000592815 SPC25Q9HBM1 224 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 STARD7Q9NQZ5 370 aa18.94■□□□□ 0.62
CIRBP-240ENST00000592815 MOXD2PA6NHM9 499 aa18.93■□□□□ 0.62
CIRBP-240ENST00000592815 ASB14A6NK59 587 aa18.93■□□□□ 0.62
CIRBP-240ENST00000592815 CLTBP09497 229 aa18.93■□□□□ 0.62
CIRBP-240ENST00000592815 NSMFQ6X4W1 530 aa18.93■□□□□ 0.62
CIRBP-240ENST00000592815 NOL8Q76FK4 1167 aaKnown RBP18.93■□□□□ 0.62
CIRBP-240ENST00000592815 VTI1AQ96AJ9 217 aa18.93■□□□□ 0.62
CIRBP-240ENST00000592815 KATNBL1Q9H079 304 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms