RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 LETM2Q2VYF4 491 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 CEP135Q66GS9 1140 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 APTXQ7Z2E3 356 aaKnown RBP22.3■■□□□ 1.16
MBD3-209ENST00000592012 KIAA0825Q8IV33 1275 aa22.3■■□□□ 1.16
MBD3-209ENST00000592012 SLX4Q8IY92 1834 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 UBA7P41226 1012 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 FKBP1AP62942 108 aaKnown RBP22.29■■□□□ 1.16
MBD3-209ENST00000592012 DACT2Q5SW24 774 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 NEK8Q86SG6 692 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 REXO1Q8N1G1 1221 aaKnown RBP22.29■■□□□ 1.16
MBD3-209ENST00000592012 EHD4Q9H223 541 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 PCDHAC2Q9Y5I4 1007 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 SCN9AQ15858 1988 aa22.29■■□□□ 1.16
MBD3-209ENST00000592012 A0A1B0GTH6 734 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 SLURP2P0DP57 97 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 ZNF543Q08ER8 600 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 CDKAL1Q5VV42 579 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 RRAGBQ5VZM2 374 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 SPECC1LQ69YQ0 1117 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 CCDC112Q8NEF3 446 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 TSC1Q92574 1164 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 BIN2Q9UBW5 565 aaPredicted RBP22.28■■□□□ 1.16
MBD3-209ENST00000592012 C10orf71Q711Q0 1435 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 PSDA5PKW4 1024 aaPredicted RBP22.28■■□□□ 1.16
MBD3-209ENST00000592012 TBCKQ8TEA7 893 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 GPCPD1Q9NPB8 672 aa22.28■■□□□ 1.16
MBD3-209ENST00000592012 ECE2O60344 883 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
MBD3-209ENST00000592012 OR52Z1P0C646 297 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 JAKMIP3Q5VZ66 844 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 COA7Q96BR5 231 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 GREB1LQ9C091 1923 aaPredicted RBP22.27■■□□□ 1.16
MBD3-209ENST00000592012 GOLGA8FQ08AF8 430 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 GOLGA8DPQ0D2H9 430 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 ZNF658Q5TYW1 1059 aaPredicted RBP22.27■■□□□ 1.16
MBD3-209ENST00000592012 AK8Q96MA6 479 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 DNAJC18Q9H819 358 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 JMJD4Q9H9V9 463 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 RMND1Q9NWS8 449 aa22.27■■□□□ 1.16
MBD3-209ENST00000592012 RXRBP28702 533 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 CHRNA5P30532 468 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 HDLBPQ00341 1268 aaKnown RBP22.26■■□□□ 1.15
MBD3-209ENST00000592012 TMEM260Q9NX78 707 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 MPHOSPH10O00566 681 aaKnown RBP22.26■■□□□ 1.15
MBD3-209ENST00000592012 CACNB3P54284 484 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 ADGRF4Q8IZF3 695 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 PPP1R13BQ96KQ4 1090 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 CCDC17Q96LX7 622 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 KBTBD4Q9NVX7 518 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 ZNF219Q9P2Y4 722 aaPredicted RBP22.26■■□□□ 1.15
MBD3-209ENST00000592012 CTNND2Q9UQB3 1225 aa22.26■■□□□ 1.15
MBD3-209ENST00000592012 RASSF8Q8NHQ8 419 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 C7orf43Q8WVR3 580 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 IDI2Q9BXS1 227 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 DHX36Q9H2U1 1008 aaKnown RBP22.25■■□□□ 1.15
MBD3-209ENST00000592012 MYH4Q9Y623 1939 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 PNMA6FA0A0J9YX94 578 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 CTIFO43310 598 aaKnown RBP22.25■■□□□ 1.15
MBD3-209ENST00000592012 RRP9O43818 475 aaKnown RBP22.25■■□□□ 1.15
MBD3-209ENST00000592012 TCP10Q12799 353 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 ORC2Q13416 577 aaPredicted RBP22.25■■□□□ 1.15
MBD3-209ENST00000592012 TTBK2Q6IQ55 1244 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 TMEM139Q8IV31 216 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 LRRC15Q8TF66 581 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 ZNF592Q92610 1267 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 FAM198AQ9UFP1 575 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 RWDD2AQ9UIY3 292 aa22.25■■□□□ 1.15
MBD3-209ENST00000592012 DDTLA6NHG4 134 aaPredicted RBP22.24■■□□□ 1.15
MBD3-209ENST00000592012 MYL1P05976 194 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 GPATCH4Q5T3I0 446 aaKnown RBP22.24■■□□□ 1.15
MBD3-209ENST00000592012 PLIN2Q99541 437 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 ADD3Q9UEY8 706 aaKnown RBP22.24■■□□□ 1.15
MBD3-209ENST00000592012 RGS17Q9UGC6 210 aaPredicted RBP22.24■■□□□ 1.15
MBD3-209ENST00000592012 TEX33O43247 280 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 ADCY7P51828 1080 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 RBM5P52756 815 aaKnown RBP eCLIP22.24■■□□□ 1.15
MBD3-209ENST00000592012 ATP2B2Q01814 1243 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 TC2NQ8N9U0 490 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 CNKSR1Q969H4 720 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 CTAGE1Q96RT6 745 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 PI4KBQ9UBF8 816 aa22.24■■□□□ 1.15
MBD3-209ENST00000592012 TNS1Q9HBL0 1735 aaKnown RBP22.23■■□□□ 1.15
MBD3-209ENST00000592012 EDIL3O43854 480 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 PPP1R11O60927 126 aaPredicted RBP22.23■■□□□ 1.15
MBD3-209ENST00000592012 HSP90AA2PQ14568 343 aaPredicted RBP22.23■■□□□ 1.15
MBD3-209ENST00000592012 SH3BP5LQ7L8J4 393 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 GDAQ9Y2T3 454 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 ZNF646O15015 1829 aaPredicted RBP22.23■■□□□ 1.15
MBD3-209ENST00000592012 SIPA1L1O43166 1804 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 KIF2AO00139 706 aaPredicted RBP22.23■■□□□ 1.15
MBD3-209ENST00000592012 COBLO75128 1261 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 PRCPP42785 496 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 PAK1Q13153 545 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 CABP7Q86V35 215 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 SERPINA10Q9UK55 444 aa22.23■■□□□ 1.15
MBD3-209ENST00000592012 KLRC4O43908 158 aa22.22■■□□□ 1.15
MBD3-209ENST00000592012 TECP42680 631 aa22.22■■□□□ 1.15
MBD3-209ENST00000592012 KCNB1Q14721 858 aa22.22■■□□□ 1.15
MBD3-209ENST00000592012 PPP4R3BQ5MIZ7 849 aa22.22■■□□□ 1.15
MBD3-209ENST00000592012 KCTD1Q719H9 257 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms