RNA–Protein interactions for RNA: ENST00000591661.1

MBD1-226, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-226ENST00000591661 FBXO40Q9UH90 709 aa16.83■□□□□ 0.28
MBD1-226ENST00000591661 SH2B2O14492 632 aaPredicted RBP16.82■□□□□ 0.28
MBD1-226ENST00000591661 MYCP01106 439 aaPredicted RBP16.82■□□□□ 0.28
MBD1-226ENST00000591661 ICAM1P05362 532 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 CCL5P13501 91 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 TROAPQ12815 778 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 COL9A3Q14050 684 aaPredicted RBP16.82■□□□□ 0.28
MBD1-226ENST00000591661 CCL14Q16627 93 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 OLFML2BQ68BL8 750 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 TMTC2Q8N394 836 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 LY9Q9HBG7 655 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 PNMA2Q9UL42 364 aa16.82■□□□□ 0.28
MBD1-226ENST00000591661 DIS3Q9Y2L1 958 aaKnown RBP16.82■□□□□ 0.28
MBD1-226ENST00000591661 WDR19Q8NEZ3 1342 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 POTEFA5A3E0 1075 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 LIFRP42702 1097 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 SNAP25P60880 206 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 RNF208Q9H0X6 261 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 UNC93B1Q9H1C4 597 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 ACAD9Q9H845 621 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 FLRT1Q9NZU1 646 aa16.81■□□□□ 0.28
MBD1-226ENST00000591661 RPTORQ8N122 1335 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 DNAJC25-GNG10A0A024R161 153 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 PALM3A6NDB9 673 aaPredicted RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 GJB1P08034 283 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 HMGB1P09429 215 aaKnown RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 PRKAR2AP13861 404 aaKnown RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 SLC4A3P48751 1232 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 EXOSC10Q01780 885 aaKnown RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 TRIM32Q13049 653 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 GRM4Q14833 912 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 ZNF792Q3KQV3 632 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 ADCK5Q3MIX3 580 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 DHX32Q7L7V1 743 aaKnown RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 CATIPQ7Z7H3 387 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 PAK6Q9NQU5 681 aaPredicted RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 GPHNQ9NQX3 736 aaPredicted RBP16.8■□□□□ 0.28
MBD1-226ENST00000591661 RNF146Q9NTX7 359 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 MAD2L2Q9UI95 211 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 CCPG1Q9ULG6 757 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
MBD1-226ENST00000591661 DDAH1O94760 285 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 ALAS1P13196 640 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 CACNB2Q08289 660 aaPredicted RBP16.79■□□□□ 0.28
MBD1-226ENST00000591661 MFSD14CQ5VZR4 134 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 STAG2Q8N3U4 1231 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 MAML3Q96JK9 1138 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 TRERF1Q96PN7 1200 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 USP26Q9BXU7 913 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 CPVLQ9H3G5 476 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 HMX1Q9NP08 348 aaPredicted RBP16.79■□□□□ 0.28
MBD1-226ENST00000591661 HOMER2Q9NSB8 354 aa16.79■□□□□ 0.28
MBD1-226ENST00000591661 RBBP6Q7Z6E9 1792 aaKnown RBP16.79■□□□□ 0.28
MBD1-226ENST00000591661 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 PGK2P07205 417 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 CAPN2P17655 700 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 GJA8P48165 433 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 SGMS1Q86VZ5 419 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 ZNF654Q8IZM8 581 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 ANKRD35Q8N283 1001 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 MTMR8Q96EF0 704 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 DDX11Q96FC9 970 aa16.78■□□□□ 0.28
MBD1-226ENST00000591661 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.78■□□□□ 0.28
MBD1-226ENST00000591661 A1CFQ9NQ94 594 aaKnown RBP16.78■□□□□ 0.28
MBD1-226ENST00000591661 CCDC69A6NI79 296 aa16.77■□□□□ 0.28
MBD1-226ENST00000591661 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.28
MBD1-226ENST00000591661 EN2P19622 333 aaPredicted RBP16.77■□□□□ 0.28
MBD1-226ENST00000591661 CYP2C19P33261 490 aa16.77■□□□□ 0.28
MBD1-226ENST00000591661 CDC37Q16543 378 aaPredicted RBP16.77■□□□□ 0.28
MBD1-226ENST00000591661 MUM1L1Q5H9M0 696 aa16.77■□□□□ 0.28
MBD1-226ENST00000591661 ZNF467Q7Z7K2 595 aaPredicted RBP16.77■□□□□ 0.28
MBD1-226ENST00000591661 MSL3Q8N5Y2 521 aaKnown RBP16.77■□□□□ 0.28
MBD1-226ENST00000591661 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.28
MBD1-226ENST00000591661 JMJD4Q9H9V9 463 aa16.77■□□□□ 0.28
MBD1-226ENST00000591661 PFASO15067 1338 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 SGPL1O95470 568 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 NFXL1Q6ZNB6 911 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
MBD1-226ENST00000591661 SHISA4Q96DD7 197 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 JAKMIP1Q96N16 626 aaKnown RBP16.76■□□□□ 0.27
MBD1-226ENST00000591661 DEFB118Q96PH6 123 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 RIOX1Q9H6W3 641 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
MBD1-226ENST00000591661 DHX16O60231 1041 aaKnown RBP16.75■□□□□ 0.27
MBD1-226ENST00000591661 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
MBD1-226ENST00000591661 CALM1P0DP23 149 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 CALM2P0DP24 149 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 CALM3P0DP25 149 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 CYBAP13498 195 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 TAL1P17542 331 aaPredicted RBP16.75■□□□□ 0.27
MBD1-226ENST00000591661 KIF5BP33176 963 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 SLC35G1Q2M3R5 365 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 QRICH1Q2TAL8 776 aa16.75■□□□□ 0.27
MBD1-226ENST00000591661 MAMDC4Q6UXC1 1216 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms