RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 ABHD16BQ9H3Z7 469 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 CLIP2Q9UDT6 1046 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 MYH4Q9Y623 1939 aa19.05■□□□□ 0.64
DDX39A-216ENST00000591275 MINDY4BA8MYZ0 360 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 ATP2A1O14983 1001 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 COL9A1P20849 921 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 CYP2C18P33260 490 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 GJA9P57773 515 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 BEX3Q00994 111 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 CCDC85BQ15834 202 aaPredicted RBP19.04■□□□□ 0.64
DDX39A-216ENST00000591275 ZSCAN25Q6NSZ9 544 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 FAM126BQ8IXS8 530 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 STRBPQ96SI9 672 aaKnown RBP19.04■□□□□ 0.64
DDX39A-216ENST00000591275 HOMER2Q9NSB8 354 aa19.04■□□□□ 0.64
DDX39A-216ENST00000591275 GSG1L2A8MUP6 293 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 TLR3O15455 904 aaKnown RBP19.03■□□□□ 0.64
DDX39A-216ENST00000591275 SBK1Q52WX2 424 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 PSRC1Q6PGN9 363 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-216ENST00000591275 CCDC144CPQ8IYA2 1237 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 SLC38A10Q9HBR0 1119 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 ZBTB40Q9NUA8 1239 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 CXXC1Q9P0U4 656 aaPredicted RBP19.03■□□□□ 0.64
DDX39A-216ENST00000591275 COG6Q9Y2V7 657 aa19.03■□□□□ 0.64
DDX39A-216ENST00000591275 CTAGE5O15320 804 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 PRDM1O75626 825 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 IGFBP4P22692 258 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 CNTN2Q02246 1040 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 ADGRE1Q14246 886 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 AKNAD1Q5T1N1 836 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.64
DDX39A-216ENST00000591275 THEGQ9P2T0 379 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 RAPGEFL1Q9UHV5 662 aa19.02■□□□□ 0.64
DDX39A-216ENST00000591275 REV3LO60673 3130 aa19.02■□□□□ 0.63
DDX39A-216ENST00000591275 GBF1Q92538 1859 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 SMARCA5O60264 1052 aaPredicted RBP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 CXCL17Q6UXB2 119 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 LRRC47Q8N1G4 583 aaKnown RBP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 CHST13Q8NET6 341 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 ATXN2LQ8WWM7 1075 aaKnown RBP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 KATNBL1Q9H079 304 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 NKX2-4Q9H2Z4 354 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 IL23AQ9NPF7 189 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 FBXO40Q9UH90 709 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 MSRAQ9UJ68 235 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 ISY1Q9ULR0 285 aaKnown RBP19.01■□□□□ 0.63
DDX39A-216ENST00000591275 DDX19BQ9UMR2 479 aa19.01■□□□□ 0.63
DDX39A-216ENST00000591275 UMODL1Q5DID0 1318 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 IGKV6D-41A0A0C4DH26 115 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 CD4P01730 458 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 MS4A1P11836 297 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 PTGS1P23219 599 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 RAB30Q15771 203 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 HERVK_113Q902F9 699 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 CHMP4CQ96CF2 233 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 CEP95Q96GE4 821 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 ASB2Q96Q27 587 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 FEM1BQ9UK73 627 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 DDX49Q9Y6V7 483 aaKnown RBP19■□□□□ 0.63
DDX39A-216ENST00000591275 ASTN1O14525 1302 aa19■□□□□ 0.63
DDX39A-216ENST00000591275 FGBP02675 491 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 TNFAIP2Q03169 654 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 OTOP2Q7RTS6 562 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 ZNF444Q8N0Y2 327 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-216ENST00000591275 ADAMTS19Q8TE59 1207 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 OSBP2Q969R2 916 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 HIPK3Q9H422 1215 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 EPB41L4AQ9HCS5 686 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-216ENST00000591275 MTMR4Q9NYA4 1195 aa18.99■□□□□ 0.63
DDX39A-216ENST00000591275 YBX2Q9Y2T7 364 aaKnown RBP18.99■□□□□ 0.63
DDX39A-216ENST00000591275 TDO2P48775 406 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 OAZ1P54368 228 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 CCL23P55773 120 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 MRPS5P82675 430 aaKnown RBP18.98■□□□□ 0.63
DDX39A-216ENST00000591275 GIMAP6Q6P9H5 292 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 MKL1Q969V6 931 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 SLC28A3Q9HAS3 691 aa18.98■□□□□ 0.63
DDX39A-216ENST00000591275 TRANK1O15050 2925 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 SOWAHBA6NEL2 793 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 TMEM232C9JQI7 657 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 TTLL1O95922 423 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 APPP05067 770 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 BMP3P12645 472 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 ITGA7Q13683 1181 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 FSCN1Q16658 493 aaKnown RBP18.97■□□□□ 0.63
DDX39A-216ENST00000591275 SLFN13Q68D06 897 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 TLK2Q86UE8 772 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 FAM133AQ8N9E0 248 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 AGBL1Q96MI9 1066 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 TRPV6Q9H1D0 765 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 MTIF3Q9H2K0 278 aaKnown RBP18.97■□□□□ 0.63
DDX39A-216ENST00000591275 ACAD9Q9H845 621 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 A1CFQ9NQ94 594 aaKnown RBP18.97■□□□□ 0.63
DDX39A-216ENST00000591275 RNF146Q9NTX7 359 aa18.97■□□□□ 0.63
DDX39A-216ENST00000591275 GPAA1O43292 621 aa18.96■□□□□ 0.63
DDX39A-216ENST00000591275 RABGGTBP53611 331 aa18.96■□□□□ 0.63
DDX39A-216ENST00000591275 NKX3-2P78367 333 aa18.96■□□□□ 0.63
DDX39A-216ENST00000591275 TSHZ3Q63HK5 1081 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms