RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 EXOSC10Q01780 885 aaKnown RBP18.59■□□□□ 0.57
NFIX-213ENST00000591028 CCDC96Q2M329 555 aa18.59■□□□□ 0.57
NFIX-213ENST00000591028 MAP3K21Q5TCX8 1036 aa18.59■□□□□ 0.57
NFIX-213ENST00000591028 CCAR1Q8IX12 1150 aaKnown RBP18.59■□□□□ 0.57
NFIX-213ENST00000591028 SPICE1Q8N0Z3 855 aa18.59■□□□□ 0.57
NFIX-213ENST00000591028 PRPF38AQ8NAV1 312 aaKnown RBP18.59■□□□□ 0.57
NFIX-213ENST00000591028 LY9Q9HBG7 655 aa18.59■□□□□ 0.57
NFIX-213ENST00000591028 ZMYND8Q9ULU4 1186 aaPredicted RBP18.59■□□□□ 0.57
NFIX-213ENST00000591028 SLC12A7Q9Y666 1083 aa18.59■□□□□ 0.57
NFIX-213ENST00000591028 A0A0G2JMZ2 1700 aa18.58■□□□□ 0.57
NFIX-213ENST00000591028 SNHG28P0DPA3 235 aa18.58■□□□□ 0.56
NFIX-213ENST00000591028 GNAQP50148 359 aa18.58■□□□□ 0.56
NFIX-213ENST00000591028 IKQ13123 557 aaPredicted RBP18.58■□□□□ 0.56
NFIX-213ENST00000591028 ANKLE1Q8NAG6 615 aa18.58■□□□□ 0.56
NFIX-213ENST00000591028 CTCFLQ8NI51 663 aaPredicted RBP18.58■□□□□ 0.56
NFIX-213ENST00000591028 USP6NLQ92738 828 aa18.58■□□□□ 0.56
NFIX-213ENST00000591028 CHMP4CQ96CF2 233 aa18.58■□□□□ 0.56
NFIX-213ENST00000591028 CTDP1Q9Y5B0 961 aaPredicted RBP18.58■□□□□ 0.56
NFIX-213ENST00000591028 LAMA2P24043 3122 aaKnown RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 RLFQ13129 1914 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 CCDC196A0A1B0GTZ2 297 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 SOX1O00570 391 aaPredicted RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 PARP1P09874 1014 aaKnown RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 PDHBP11177 359 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 CAPN2P17655 700 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 CCND3P30281 292 aaPredicted RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 COPB2P35606 906 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 RGS2P41220 211 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 CACNB2Q08289 660 aaPredicted RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 TRAF1Q13077 416 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 MORN1Q5T089 497 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 FAM83BQ5T0W9 1011 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 PLEKHH3Q7Z736 793 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 KIF2CQ99661 725 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 APBA2Q99767 749 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 SLF1Q9BQI6 1058 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 LZTS2Q9BRK4 669 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 CWC22Q9HCG8 908 aaKnown RBP18.57■□□□□ 0.56
NFIX-213ENST00000591028 OGDHLQ9ULD0 1010 aa18.57■□□□□ 0.56
NFIX-213ENST00000591028 PFASO15067 1338 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 XRCC5P13010 732 aaKnown RBP18.56■□□□□ 0.56
NFIX-213ENST00000591028 CCNA1P78396 465 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 ZNF543Q08ER8 600 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 RABEP1Q15276 862 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 WDR78Q5VTH9 848 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 CHST3Q7LGC8 479 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 ZNF654Q8IZM8 581 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 AGXT2Q9BYV1 514 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 ALDH8A1Q9H2A2 487 aaPredicted RBP18.56■□□□□ 0.56
NFIX-213ENST00000591028 C11orf49Q9H6J7 331 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 PDRG1Q9NUG6 133 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 PPP1R9AQ9ULJ8 1098 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 RABGAP1Q9Y3P9 1069 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 MYH4Q9Y623 1939 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 PARP14Q460N5 1801 aa18.56■□□□□ 0.56
NFIX-213ENST00000591028 SYN1P17600 705 aa18.55■□□□□ 0.56
NFIX-213ENST00000591028 RBM28Q9NW13 759 aaKnown RBP18.55■□□□□ 0.56
NFIX-213ENST00000591028 BTBD7Q9P203 1132 aa18.55■□□□□ 0.56
NFIX-213ENST00000591028 SPDYE16A6NNV3 312 aaPredicted RBP18.54■□□□□ 0.56
NFIX-213ENST00000591028 TMEM232C9JQI7 657 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 ZBTB43O43298 467 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 ZBED4O75132 1171 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 DSG3P32926 999 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 OAZ1P54368 228 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 TROAPQ12815 778 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 APOA5Q6Q788 366 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 BTNL9Q6UXG8 535 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 Q6ZUG5 572 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 LRCH3Q96II8 777 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 FLRT1Q9NZU1 646 aa18.54■□□□□ 0.56
NFIX-213ENST00000591028 ZNF236Q9UL36 1845 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 ST18O60284 1047 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 SMARCA1P28370 1054 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 MAP2K5Q13163 448 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 GRM4Q14833 912 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 TRMT44Q8IYL2 757 aaKnown RBP18.53■□□□□ 0.56
NFIX-213ENST00000591028 BRF1Q92994 677 aa18.53■□□□□ 0.56
NFIX-213ENST00000591028 UPF3BQ9BZI7 483 aaKnown RBP18.53■□□□□ 0.56
NFIX-213ENST00000591028 COL11A1P12107 1806 aaPredicted RBP18.53■□□□□ 0.56
NFIX-213ENST00000591028 KLF18A0A0U1RQI7 1052 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 DHX16O60231 1041 aaKnown RBP18.52■□□□□ 0.56
NFIX-213ENST00000591028 EVCP57679 992 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 KIAA1755Q5JYT7 1200 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 LHX8Q68G74 356 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 CPLX2Q6PUV4 134 aaKnown RBP18.52■□□□□ 0.56
NFIX-213ENST00000591028 GDF15Q99988 308 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 MTMR7Q9Y216 660 aa18.52■□□□□ 0.56
NFIX-213ENST00000591028 A0A1W2PPC1 479 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 GOLGA8BA8MQT2 603 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 ATP2A1O14983 1001 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 NEK4P51957 841 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 SYDE2Q5VT97 1194 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 KCTD1Q719H9 257 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 KIFC2Q96AC6 838 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 ZNF274Q96GC6 653 aaPredicted RBP18.51■□□□□ 0.55
NFIX-213ENST00000591028 NUP88Q99567 741 aaPredicted RBP18.51■□□□□ 0.55
NFIX-213ENST00000591028 LRRC2Q9BYS8 371 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 ADAMTS5Q9UNA0 930 aa18.51■□□□□ 0.55
NFIX-213ENST00000591028 PALM3A6NDB9 673 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms