RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 CCNA1P78396 465 aa25.14■■□□□ 1.62
R3HDM4-206ENST00000590454 IFIT1BQ5T764 474 aaKnown RBP25.14■■□□□ 1.62
R3HDM4-206ENST00000590454 DHX32Q7L7V1 743 aaKnown RBP25.14■■□□□ 1.62
R3HDM4-206ENST00000590454 RABGAP1Q9Y3P9 1069 aa25.14■■□□□ 1.62
R3HDM4-206ENST00000590454 CUL9Q8IWT3 2517 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 CASTP20810 708 aaKnown RBP25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 WTAPQ15007 396 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 PNMA1Q8ND90 353 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 GMCL1Q96IK5 515 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 KAT14Q9H8E8 782 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 PARP14Q460N5 1801 aa25.13■■□□□ 1.61
R3HDM4-206ENST00000590454 MSCO60682 206 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 EIF5BO60841 1220 aaKnown RBP25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 ZNF697Q5TEC3 545 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 KCTD1Q719H9 257 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 FAM161BQ96MY7 647 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 BACH2Q9BYV9 841 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 PRKAG2Q9UGJ0 569 aa25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 DDX20Q9UHI6 824 aaKnown RBP25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 FRMPD2Q68DX3 1309 aaPredicted RBP25.12■■□□□ 1.61
R3HDM4-206ENST00000590454 PDHBP11177 359 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 BMP3P12645 472 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 SLC1A4P43007 532 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 SART3Q15020 963 aaKnown RBP25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 BLOC1S2Q6QNY1 142 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 SAMD1Q6SPF0 538 aaPredicted RBP25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 TMEM87BQ96K49 555 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 UPF3BQ9BZI7 483 aaKnown RBP25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 ZSWIM6Q9HCJ5 1215 aa25.11■■□□□ 1.61
R3HDM4-206ENST00000590454 ERICH2A1L162 156 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 SLC15A5A6NIM6 579 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 SPDYE16A6NNV3 312 aaPredicted RBP25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 FLOT1O75955 427 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 SNHG28P0DPA3 235 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 RPS6KB1P23443 525 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 TTBK2Q6IQ55 1244 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 FLRT1Q9NZU1 646 aa25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 ISY1Q9ULR0 285 aaKnown RBP25.1■■□□□ 1.61
R3HDM4-206ENST00000590454 CNMDO75829 334 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 HMGB1P09429 215 aaKnown RBP25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 PTPREP23469 700 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 PSMA5P28066 241 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 CNGA1P29973 690 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 ATN1P54259 1190 aaPredicted RBP25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 COG2Q14746 738 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 CCDC96Q2M329 555 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 WDR78Q5VTH9 848 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 DCAF4Q8WV16 495 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 ATG4CQ96DT6 458 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 MTA3Q9BTC8 594 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 MYL10Q9BUA6 226 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 GPCPD1Q9NPB8 672 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 WDR19Q8NEZ3 1342 aa25.09■■□□□ 1.61
R3HDM4-206ENST00000590454 TMEM232C9JQI7 657 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 DNM1LO00429 736 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 GOLGA8HP0CJ92 632 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 DSG3P32926 999 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 ANAPC15P60006 121 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 RUFY3Q7L099 469 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 RAB11FIP4Q86YS3 637 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 IL17RAQ96F46 866 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 C22orf23Q9BZE7 217 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 TM6SF1Q9BZW5 370 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 IVNS1ABPQ9Y6Y0 642 aa25.08■■□□□ 1.61
R3HDM4-206ENST00000590454 HOXC6P09630 235 aa25.07■■□□□ 1.6
R3HDM4-206ENST00000590454 ZNF543Q08ER8 600 aa25.07■■□□□ 1.6
R3HDM4-206ENST00000590454 Q6ZUG5 572 aa25.07■■□□□ 1.6
R3HDM4-206ENST00000590454 CPVLQ9H3G5 476 aa25.07■■□□□ 1.6
R3HDM4-206ENST00000590454 BRPF3Q9ULD4 1205 aa25.07■■□□□ 1.6
R3HDM4-206ENST00000590454 SLC16A2P36021 539 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 LIFRP42702 1097 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 RTP1P59025 263 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 NFXL1Q6ZNB6 911 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 KIF2CQ99661 725 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 SLF1Q9BQI6 1058 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 BTBD7Q9P203 1132 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 FEM1BQ9UK73 627 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 PPP1R9AQ9ULJ8 1098 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 CYP46A1Q9Y6A2 500 aa25.06■■□□□ 1.6
R3HDM4-206ENST00000590454 TROAPQ12815 778 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 ZNF654Q8IZM8 581 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 STAG2Q8N3U4 1231 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 KIFC2Q96AC6 838 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 CDX2Q99626 313 aaPredicted RBP25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 HOXC10Q9NYD6 342 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 ADAMTS5Q9UNA0 930 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 A0A0G2JMZ2 1700 aa25.05■■□□□ 1.6
R3HDM4-206ENST00000590454 RXRAP19793 462 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 SNAP25P60880 206 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 GRB14Q14449 540 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 LBX2Q6XYB7 198 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 SGMS1Q86VZ5 419 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 ARRDC4Q8NCT1 418 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 NPLOC4Q8TAT6 608 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 MAD2L2Q9UI95 211 aa25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 COL11A1P12107 1806 aaPredicted RBP25.04■■□□□ 1.6
R3HDM4-206ENST00000590454 CCDC69A6NI79 296 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 CYP2C19P33261 490 aa25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 RBM25P49756 843 aaKnown RBP25.03■■□□□ 1.6
R3HDM4-206ENST00000590454 STAT2P52630 851 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms