RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 ACAD9Q9H845 621 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 RNF146Q9NTX7 359 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 CCPG1Q9ULG6 757 aa14.17□□□□□ -0.14
TPM4-212ENST00000590180 TNKSO95271 1327 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 COL11A1P12107 1806 aaPredicted RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 ZNFX1Q9P2E3 1918 aaKnown RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 MSCO60682 206 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 IGHA2P01877 340 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 MYCNP04198 464 aaPredicted RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 CYBAP13498 195 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 ZNF543Q08ER8 600 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 BMP2KLQ5H9B9 411 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 ANO1Q5XXA6 986 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 RALYLQ86SE5 291 aaKnown RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 ENAHQ8N8S7 591 aaPredicted RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 ESYT1Q9BSJ8 1104 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 UBA5Q9GZZ9 404 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 C11orf49Q9H6J7 331 aa14.16□□□□□ -0.14
TPM4-212ENST00000590180 RBM8AQ9Y5S9 174 aaKnown RBP14.16□□□□□ -0.14
TPM4-212ENST00000590180 ZNF536O15090 1300 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 E7EWF7 191 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 POTEB2H3BUK9 544 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
TPM4-212ENST00000590180 IFIT1BQ5T764 474 aaKnown RBP14.15□□□□□ -0.14
TPM4-212ENST00000590180 CYB5R4Q7L1T6 521 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 NCOA7Q8NI08 942 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 RANBP17Q9H2T7 1088 aaKnown RBP14.15□□□□□ -0.14
TPM4-212ENST00000590180 CNPY2Q9Y2B0 182 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 NR2E3Q9Y5X4 410 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 PARP14Q460N5 1801 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 A0A0G2JMZ2 1700 aa14.15□□□□□ -0.14
TPM4-212ENST00000590180 DNAJC25-GNG10A0A024R161 153 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 ERICH2A1L162 156 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 H0YGN5 161 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 IFIT3O14879 490 aaKnown RBP14.14□□□□□ -0.15
TPM4-212ENST00000590180 SEPT4O43236 478 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 EVI5O60447 810 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 ICAM1P05362 532 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 PARP1P09874 1014 aaKnown RBP14.14□□□□□ -0.15
TPM4-212ENST00000590180 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 TAL1P17542 331 aaPredicted RBP14.14□□□□□ -0.15
TPM4-212ENST00000590180 MUM1L1Q5H9M0 696 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 CASC1Q6TDU7 716 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 NSMFQ6X4W1 530 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 ARRDC4Q8NCT1 418 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 CPVLQ9H3G5 476 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 VAT1LQ9HCJ6 419 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 ANO2Q9NQ90 1003 aa14.14□□□□□ -0.15
TPM4-212ENST00000590180 TNRC18O15417 2968 aaPredicted RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 DHX16O60231 1041 aaKnown RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 MNX1P50219 401 aaPredicted RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 CNTN2Q02246 1040 aa14.13□□□□□ -0.15
TPM4-212ENST00000590180 GJC2Q5T442 439 aaPredicted RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 CHST3Q7LGC8 479 aa14.13□□□□□ -0.15
TPM4-212ENST00000590180 MSL3Q8N5Y2 521 aaKnown RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 LSG1Q9H089 658 aaKnown RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 A1CFQ9NQ94 594 aaKnown RBP14.13□□□□□ -0.15
TPM4-212ENST00000590180 NRBP1Q9UHY1 535 aa14.13□□□□□ -0.15
TPM4-212ENST00000590180 TAF6LQ9Y6J9 622 aa14.13□□□□□ -0.15
TPM4-212ENST00000590180 SNAI1O95863 264 aaPredicted RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 CENPBP07199 599 aaPredicted RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 WTAPQ15007 396 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 SART3Q15020 963 aaKnown RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 SEC23AQ15436 765 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 ASPRV1Q53RT3 343 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 MAMDC4Q6UXC1 1216 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 STOX1Q6ZVD7 989 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.12□□□□□ -0.15
TPM4-212ENST00000590180 ZNF467Q7Z7K2 595 aaPredicted RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 SENP6Q9GZR1 1112 aaPredicted RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 ZHX1Q9UKY1 873 aaPredicted RBP14.12□□□□□ -0.15
TPM4-212ENST00000590180 PNMA2Q9UL42 364 aa14.12□□□□□ -0.15
TPM4-212ENST00000590180 CDC45O75419 566 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 ZNF865P0CJ78 1059 aaPredicted RBP14.11□□□□□ -0.15
TPM4-212ENST00000590180 RARBP10826 455 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 BAATQ14032 418 aaPredicted RBP14.11□□□□□ -0.15
TPM4-212ENST00000590180 TMEM67Q5HYA8 995 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 ADGRF4Q8IZF3 695 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 FAM133AQ8N9E0 248 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.11□□□□□ -0.15
TPM4-212ENST00000590180 CYP39A1Q9NYL5 469 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 FAM184BQ9ULE4 1060 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 PFASO15067 1338 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 SYNGAP1Q96PV0 1343 aa14.11□□□□□ -0.15
TPM4-212ENST00000590180 SMCHD1A6NHR9 2005 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 PTPDC1A2A3K4 754 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 SOWAHBA6NEL2 793 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 ASB14A6NK59 587 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 KBTBD13C9JR72 458 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 SLC27A2O14975 620 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 AKR1A1P14550 325 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 ACVR2BQ13705 512 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 USH1GQ495M9 461 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 CREB3L3Q68CJ9 461 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 ARMCX2Q7L311 632 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 CCDC144CPQ8IYA2 1237 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 ABHD16BQ9H3Z7 469 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 XPNPEP3Q9NQH7 507 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 ZNF236Q9UL36 1845 aa14.1□□□□□ -0.15
TPM4-212ENST00000590180 BRCA2P51587 3418 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms