RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 GTPBP6O43824 516 aaPredicted RBP15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 ARHGEF15O94989 841 aa15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 TRIM27P14373 513 aa15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 TTLL4Q14679 1199 aa15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 MSL3Q8N5Y2 521 aaKnown RBP15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 FGD4Q96M96 766 aa15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 NOC4LQ9BVI4 516 aaKnown RBP15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 SWAP70Q9UH65 585 aa15.42■□□□□ 0.06
NEDD4L-227ENST00000590020 B4GALT4O60513 344 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 PDE6AP16499 860 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 PSMC6P62333 389 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 SLFNL1Q499Z3 407 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 NOL8Q76FK4 1167 aaKnown RBP15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ARMCX2Q7L311 632 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 CPXCR1Q8N123 301 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 SSH3Q8TE77 659 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ARNTL2Q8WYA1 636 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ARHGAP45Q92619 1136 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ARMT1Q9H993 441 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 BAZ2AQ9UIF9 1905 aaKnown RBP15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ASTN1O14525 1302 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 GRIN2DO15399 1336 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 ZNF532Q9HCE3 1301 aa15.41■□□□□ 0.06
NEDD4L-227ENST00000590020 COPB2P35606 906 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 CDK8P49336 464 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 ITGA7Q13683 1181 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 TMEM67Q5HYA8 995 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 DEFB128Q7Z7B8 93 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 CCDC144CPQ8IYA2 1237 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 SLC43A3Q8NBI5 491 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 FRAT1Q92837 279 aaPredicted RBP15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 HLA-CQ95604 372 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 TEX13BQ9BXU2 312 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 ABHD16BQ9H3Z7 469 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 COG5Q9UP83 839 aa15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 DDX49Q9Y6V7 483 aaKnown RBP15.4■□□□□ 0.06
NEDD4L-227ENST00000590020 CT47B1P0C2W7 299 aaPredicted RBP15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 ATP8B2P98198 1209 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 ANKRD35Q8N283 1001 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 AGBL1Q96MI9 1066 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 SLF1Q9BQI6 1058 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 KATNBL1Q9H079 304 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 RAVER2Q9HCJ3 691 aaKnown RBP15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 GOPCQ9HD26 462 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 U3KPZ7 1027 aaPredicted RBP15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 TRANK1O15050 2925 aa15.39■□□□□ 0.05
NEDD4L-227ENST00000590020 MUC6Q6W4X9 2439 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 SCN5AQ14524 2016 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 PI4K2BG5E9Z4 385 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 POU3F3P20264 500 aaPredicted RBP15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 MRE11P49959 708 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 CNTN2Q02246 1040 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 TNFAIP2Q03169 654 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 AACSQ86V21 672 aa15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 RPUSD2Q8IZ73 545 aaKnown RBP15.38■□□□□ 0.05
NEDD4L-227ENST00000590020 TCRBV5S4A2TA0A5A2 114 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 GRB10Q13322 594 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 TLK2Q86UE8 772 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 TMEM57Q8N5G2 664 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 UIMC1Q96RL1 719 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 KANSL2Q9H9L4 492 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 HOMER2Q9NSB8 354 aa15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 COL4A4P53420 1690 aaPredicted RBP15.37■□□□□ 0.05
NEDD4L-227ENST00000590020 RBAK-RBAKDNI3L0D1 243 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 GOLIM4O00461 696 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 DYNC1LI2O43237 492 aaPredicted RBP15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 MBD4O95243 580 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 CYP2C9P11712 490 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 TAP1Q03518 808 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 FSCN1Q16658 493 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 STK11IPQ8N1F8 1099 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 PPP1R13LQ8WUF5 828 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 KIFC2Q96AC6 838 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 CCDC17Q96LX7 622 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 DNAJC2Q99543 621 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 BCL11AQ9H165 835 aa15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 TRMT13Q9NUP7 481 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 NOP58Q9Y2X3 529 aaKnown RBP15.36■□□□□ 0.05
NEDD4L-227ENST00000590020 USP17L12C9JPN9 530 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 USP17L21D6R901 530 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 CHGBP05060 677 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 SMPD1P17405 629 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 C12orf60Q5U649 245 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 PDGFCQ9NRA1 345 aa15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 GNEQ9Y223 722 aaKnown RBP15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 CTDP1Q9Y5B0 961 aaPredicted RBP15.35■□□□□ 0.05
NEDD4L-227ENST00000590020 LPXNO60711 386 aa15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 ZBED4O75132 1171 aa15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 CABYRO75952 493 aa15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 NKX3-2P78367 333 aa15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 TTF1Q15361 905 aaPredicted RBP15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 TMED8Q6PL24 325 aaPredicted RBP15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 EEPD1Q7L9B9 569 aa15.34■□□□□ 0.05
NEDD4L-227ENST00000590020 SNX27Q96L92 541 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms