RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 PRPF38AQ8NAV1 312 aaKnown RBP21.49■■□□□ 1.03
CXXC1-211ENST00000589548 ABHD16BQ9H3Z7 469 aa21.49■■□□□ 1.03
CXXC1-211ENST00000589548 CXXC1Q9P0U4 656 aaPredicted RBP21.49■■□□□ 1.03
CXXC1-211ENST00000589548 REV3LO60673 3130 aa21.49■■□□□ 1.03
CXXC1-211ENST00000589548 CYP2C18P33260 490 aa21.48■■□□□ 1.03
CXXC1-211ENST00000589548 PSRC1Q6PGN9 363 aaPredicted RBP21.48■■□□□ 1.03
CXXC1-211ENST00000589548 RPAP2Q8IXW5 612 aaPredicted RBP21.48■■□□□ 1.03
CXXC1-211ENST00000589548 TMEM199Q8N511 208 aa21.48■■□□□ 1.03
CXXC1-211ENST00000589548 VTI1AQ96AJ9 217 aa21.48■■□□□ 1.03
CXXC1-211ENST00000589548 SLC38A10Q9HBR0 1119 aa21.48■■□□□ 1.03
CXXC1-211ENST00000589548 THEGQ9P2T0 379 aa21.48■■□□□ 1.03
CXXC1-211ENST00000589548 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 RAB11FIP3O75154 756 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 CD4P01730 458 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 SBK1Q52WX2 424 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 GNASQ5JWF2 1037 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 CCDC174Q6PII3 467 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 ATXN2LQ8WWM7 1075 aaKnown RBP21.47■■□□□ 1.03
CXXC1-211ENST00000589548 ASB2Q96Q27 587 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 ASTN1O14525 1302 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 UMODL1Q5DID0 1318 aa21.47■■□□□ 1.03
CXXC1-211ENST00000589548 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.46■■□□□ 1.03
CXXC1-211ENST00000589548 GSG1L2A8MUP6 293 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 HMMRO75330 724 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 NKX3-2P78367 333 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 BEX3Q00994 111 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 CCDC144CPQ8IYA2 1237 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 ANKRD35Q8N283 1001 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 HERVK_113Q902F9 699 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 KIFC2Q96AC6 838 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 STRBPQ96SI9 672 aaKnown RBP21.46■■□□□ 1.03
CXXC1-211ENST00000589548 NKX2-4Q9H2Z4 354 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 SPC25Q9HBM1 224 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 IL23AQ9NPF7 189 aa21.46■■□□□ 1.03
CXXC1-211ENST00000589548 YBX2Q9Y2T7 364 aaKnown RBP21.46■■□□□ 1.03
CXXC1-211ENST00000589548 ZBED4O75132 1171 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 PTGS1P23219 599 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 HNRNPUQ00839 825 aaKnown RBP eCLIP21.45■■□□□ 1.02
CXXC1-211ENST00000589548 CNTN2Q02246 1040 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 CCDC85BQ15834 202 aaPredicted RBP21.45■■□□□ 1.02
CXXC1-211ENST00000589548 ADAMTS19Q8TE59 1207 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 CLIP2Q9UDT6 1046 aa21.45■■□□□ 1.02
CXXC1-211ENST00000589548 TLR3O15455 904 aaKnown RBP21.44■■□□□ 1.02
CXXC1-211ENST00000589548 RAB30Q15771 203 aa21.44■■□□□ 1.02
CXXC1-211ENST00000589548 SLC43A3Q8NBI5 491 aa21.44■■□□□ 1.02
CXXC1-211ENST00000589548 CHST13Q8NET6 341 aa21.44■■□□□ 1.02
CXXC1-211ENST00000589548 MKNK2Q9HBH9 465 aa21.44■■□□□ 1.02
CXXC1-211ENST00000589548 EPB41L4AQ9HCS5 686 aaPredicted RBP21.44■■□□□ 1.02
CXXC1-211ENST00000589548 SCN5AQ14524 2016 aa21.44■■□□□ 1.02
CXXC1-211ENST00000589548 PRRC2BQ5JSZ5 2229 aaKnown RBP21.43■■□□□ 1.02
CXXC1-211ENST00000589548 MINDY4BA8MYZ0 360 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 PLA2G5P39877 138 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 CXCL17Q6UXB2 119 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 LRRC47Q8N1G4 583 aaKnown RBP21.43■■□□□ 1.02
CXXC1-211ENST00000589548 FAM133AQ8N9E0 248 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 CEP95Q96GE4 821 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 HOMER2Q9NSB8 354 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 FBXO40Q9UH90 709 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 MSRAQ9UJ68 235 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 DDX49Q9Y6V7 483 aaKnown RBP21.43■■□□□ 1.02
CXXC1-211ENST00000589548 GRIN2DO15399 1336 aa21.43■■□□□ 1.02
CXXC1-211ENST00000589548 PRDM1O75626 825 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 IGFBP4P22692 258 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 OAZ1P54368 228 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 ZSCAN25Q6NSZ9 544 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 OSBP2Q969R2 916 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 MKL1Q969V6 931 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 HIPK3Q9H422 1215 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 FEM1BQ9UK73 627 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 GNEQ9Y223 722 aaKnown RBP21.42■■□□□ 1.02
CXXC1-211ENST00000589548 COG6Q9Y2V7 657 aa21.42■■□□□ 1.02
CXXC1-211ENST00000589548 CTDP1Q9Y5B0 961 aaPredicted RBP21.42■■□□□ 1.02
CXXC1-211ENST00000589548 TRANK1O15050 2925 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 SOWAHBA6NEL2 793 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 MRPS5P82675 430 aaKnown RBP21.41■■□□□ 1.02
CXXC1-211ENST00000589548 TNFAIP2Q03169 654 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 GIMAP6Q6P9H5 292 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 VWCEQ96DN2 955 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 FAM122AQ96E09 287 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 UHRF1Q96T88 793 aaPredicted RBP21.41■■□□□ 1.02
CXXC1-211ENST00000589548 WNT8AQ9H1J5 351 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 MTMR4Q9NYA4 1195 aa21.41■■□□□ 1.02
CXXC1-211ENST00000589548 ZNF536O15090 1300 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 SMARCA5O60264 1052 aaPredicted RBP21.4■■□□□ 1.02
CXXC1-211ENST00000589548 FGBP02675 491 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 RABGGTBP53611 331 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 OTOP2Q7RTS6 562 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 TLK2Q86UE8 772 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 GMCL1P1Q8NEA9 526 aa21.4■■□□□ 1.02
CXXC1-211ENST00000589548 NOC4LQ9BVI4 516 aaKnown RBP21.4■■□□□ 1.02
CXXC1-211ENST00000589548 A1CFQ9NQ94 594 aaKnown RBP21.4■■□□□ 1.02
CXXC1-211ENST00000589548 PLIN4Q96Q06 1357 aa21.39■■□□□ 1.02
CXXC1-211ENST00000589548 CCL23P55773 120 aa21.39■■□□□ 1.01
CXXC1-211ENST00000589548 ITGA7Q13683 1181 aa21.39■■□□□ 1.01
CXXC1-211ENST00000589548 FSCN1Q16658 493 aaKnown RBP21.39■■□□□ 1.01
CXXC1-211ENST00000589548 TMEM63BQ5T3F8 832 aa21.39■■□□□ 1.01
CXXC1-211ENST00000589548 NECAB3Q96P71 396 aaPredicted RBP21.39■■□□□ 1.01
CXXC1-211ENST00000589548 TRPV6Q9H1D0 765 aa21.39■■□□□ 1.01
CXXC1-211ENST00000589548 ACAD9Q9H845 621 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms