RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 ZNF518AQ6AHZ1 1483 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 RGS13O14921 159 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 ATE1O95260 518 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 SPINK2P20155 84 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 CTSKP43235 329 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 HSPA2P54652 639 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 NBPF12Q5TAG4 269 aaPredicted RBP4.55□□□□□ -1.68
ZNF540-207ENST00000589285 CRBNQ96SW2 442 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 BCL11AQ9H165 835 aa4.55□□□□□ -1.68
ZNF540-207ENST00000589285 HFM1A2PYH4 1435 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 GNAT3A8MTJ3 354 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 PRAMEF1O95521 474 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 PLCL1Q15111 1095 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 FLCNQ8NFG4 579 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 CARS2Q9HA77 564 aaKnown RBP4.54□□□□□ -1.68
ZNF540-207ENST00000589285 ANGEL1Q9UNK9 670 aaKnown RBP4.54□□□□□ -1.68
ZNF540-207ENST00000589285 LTBP4Q8N2S1 1624 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 COBLO75128 1261 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 CLEC3AO75596 197 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 SF1Q15637 639 aaKnown RBP4.54□□□□□ -1.68
ZNF540-207ENST00000589285 GNPTABQ3T906 1256 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 CDCP2Q5VXM1 449 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 TMEM132EQ6IEE7 984 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 RASGRP4Q8TDF6 673 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 NOL6Q9H6R4 1146 aaKnown RBP4.54□□□□□ -1.68
ZNF540-207ENST00000589285 SEMA3GQ9NS98 782 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 PCDHA11Q9Y5I1 949 aa4.54□□□□□ -1.68
ZNF540-207ENST00000589285 C3P01024 1663 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 GUCY2CP25092 1073 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 DPY19L1Q2PZI1 675 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 TIGD5Q53EQ6 642 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 FYB2Q5VWT5 728 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 KIAA1211LQ6NV74 962 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 REXO1Q8N1G1 1221 aaKnown RBP4.53□□□□□ -1.68
ZNF540-207ENST00000589285 VWCEQ96DN2 955 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 METTL22Q9BUU2 404 aaPredicted RBP4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ADAMTS10Q9H324 1103 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ZFP64Q9NPA5 681 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 SETD1BQ9UPS6 1966 aaKnown RBP4.53□□□□□ -1.68
ZNF540-207ENST00000589285 KIAA1107Q9UPP5 1409 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 POLR1AO95602 1720 aaPredicted RBP4.53□□□□□ -1.68
ZNF540-207ENST00000589285 H0Y8X5 98 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 GRIA2P42262 883 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 IKZF1Q13422 519 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ARTNQ5T4W7 220 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 CREG2Q8IUH2 290 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 KCT2Q8NC54 265 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 KLHL6Q8WZ60 621 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ZDHHC15Q96MV8 337 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 FOXP3Q9BZS1 431 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ADAM30Q9UKF2 790 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 FBXL21Q9UKT6 434 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 ARHGEF5Q12774 1597 aa4.53□□□□□ -1.68
ZNF540-207ENST00000589285 VAMP4O75379 141 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 DDAH1O94760 285 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 IFNGR1P15260 489 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 TPP2P29144 1249 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-207ENST00000589285 GIPRP48546 466 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 HK2P52789 917 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 ARID5AQ03989 594 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 ZP2Q05996 745 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 LRP8Q14114 963 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 SIRT2Q8IXJ6 389 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 CCDC144CPQ8IYA2 1237 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 PMFBP1Q8TBY8 1022 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 ZNF451Q9Y4E5 1061 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 ESR1P03372 595 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 GP2P55259 537 aaKnown RBP4.52□□□□□ -1.69
ZNF540-207ENST00000589285 IDI1Q13907 227 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 DTX1Q86Y01 620 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 YTHDC1Q96MU7 727 aaKnown RBP4.52□□□□□ -1.69
ZNF540-207ENST00000589285 SLC26A8Q96RN1 970 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 MCMBPQ9BTE3 642 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 PITPNM2Q9BZ72 1349 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 KANK1Q14678 1352 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 DNMT1P26358 1616 aaKnown RBP4.52□□□□□ -1.69
ZNF540-207ENST00000589285 CYP27A1Q02318 531 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 NMIQ13287 307 aaPredicted RBP4.52□□□□□ -1.69
ZNF540-207ENST00000589285 NBPF8Q3BBV2 869 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 ANKS3Q6ZW76 656 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 HAUS7Q99871 368 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 RTEL1-TNFRSF6BF6WH68 1400 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 UHRF1BP1Q6BDS2 1440 aa4.52□□□□□ -1.69
ZNF540-207ENST00000589285 TCOF1Q13428 1488 aaKnown RBP4.51□□□□□ -1.69
ZNF540-207ENST00000589285 ABCA6Q8N139 1617 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 CPS1P31327 1500 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 ATP7AQ04656 1500 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 GSC2O15499 205 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 WNT11O96014 354 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 DDX10Q13206 875 aaKnown RBP4.51□□□□□ -1.69
ZNF540-207ENST00000589285 AUHQ13825 339 aaKnown RBP4.51□□□□□ -1.69
ZNF540-207ENST00000589285 PRSS53Q2L4Q9 553 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 YOD1Q5VVQ6 348 aaPredicted RBP4.51□□□□□ -1.69
ZNF540-207ENST00000589285 VHLLQ6RSH7 139 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 ADAT2Q7Z6V5 191 aaKnown RBP4.51□□□□□ -1.69
ZNF540-207ENST00000589285 C19orf73Q9NVV2 129 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 SLC5A6Q9Y289 635 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 UGGT1Q9NYU2 1555 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 A2MP01023 1474 aa4.51□□□□□ -1.69
ZNF540-207ENST00000589285 KIDINS220Q9ULH0 1771 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms