RNA–Protein interactions for RNA: ENST00000589214.1

ERCC1-209, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-209ENST00000589214 KIAA1211Q6ZU35 1233 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 IQCA1Q86XH1 822 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 ANKRD35Q8N283 1001 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 CHST13Q8NET6 341 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 MAP4K1Q92918 833 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 TINF2Q9BSI4 451 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 RNF146Q9NTX7 359 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 DIS3Q9Y2L1 958 aaKnown RBP17.87■□□□□ 0.45
ERCC1-209ENST00000589214 NR2E3Q9Y5X4 410 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 U3KPZ7 1027 aaPredicted RBP17.87■□□□□ 0.45
ERCC1-209ENST00000589214 PFASO15067 1338 aa17.87■□□□□ 0.45
ERCC1-209ENST00000589214 DNAJC25-GNG10A0A024R161 153 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 SEPT4O43236 478 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 ALAS1P13196 640 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 SYDE2Q5VT97 1194 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 TTC14Q96N46 770 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 LSG1Q9H089 658 aaKnown RBP17.86■□□□□ 0.45
ERCC1-209ENST00000589214 ACAD9Q9H845 621 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 ZSWIM5Q9P217 1185 aa17.86■□□□□ 0.45
ERCC1-209ENST00000589214 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
ERCC1-209ENST00000589214 CDC45O75419 566 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 TNKSO95271 1327 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 NT5C2P49902 561 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.85■□□□□ 0.45
ERCC1-209ENST00000589214 C7orf61Q8IZ16 206 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 KRT23Q9C075 422 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 RANBP17Q9H2T7 1088 aaKnown RBP17.85■□□□□ 0.45
ERCC1-209ENST00000589214 ANO2Q9NQ90 1003 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 CCPG1Q9ULG6 757 aa17.85■□□□□ 0.45
ERCC1-209ENST00000589214 MYCNP04198 464 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-209ENST00000589214 COL6A1P12109 1028 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 ZNF543Q08ER8 600 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 BTNL9Q6UXG8 535 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 DGKHQ86XP1 1220 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 TRERF1Q96PN7 1200 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 ZSCAN10Q96SZ4 725 aaPredicted RBP17.84■□□□□ 0.45
ERCC1-209ENST00000589214 KAT14Q9H8E8 782 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 CNNM2Q9H8M5 875 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 A1CFQ9NQ94 594 aaKnown RBP17.84■□□□□ 0.45
ERCC1-209ENST00000589214 CNPY2Q9Y2B0 182 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 LRRC37A2A6NM11 1700 aa17.84■□□□□ 0.45
ERCC1-209ENST00000589214 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 DNM1LO00429 736 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 GOLGA8HP0CJ92 632 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 SNHG28P0DPA3 235 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 CCDC178Q5BJE1 867 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 MUM1L1Q5H9M0 696 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 GJC2Q5T442 439 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-209ENST00000589214 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 STOX1Q6ZVD7 989 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 CYB5R4Q7L1T6 521 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 ENAHQ8N8S7 591 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-209ENST00000589214 PNMA1Q8ND90 353 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 LENG1Q96BZ8 264 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-209ENST00000589214 FGD4Q96M96 766 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 UBAC1Q9BSL1 405 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 NRBP1Q9UHY1 535 aa17.83■□□□□ 0.44
ERCC1-209ENST00000589214 ZHX1Q9UKY1 873 aaPredicted RBP17.83■□□□□ 0.44
ERCC1-209ENST00000589214 MCM3APO60318 1980 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 E7EWF7 191 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 POTEB2H3BUK9 544 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 ICAM1P05362 532 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 CNTN2Q02246 1040 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 MSL3Q8N5Y2 521 aaKnown RBP17.82■□□□□ 0.44
ERCC1-209ENST00000589214 SENP6Q9GZR1 1112 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-209ENST00000589214 COLQQ9Y215 455 aaPredicted RBP17.82■□□□□ 0.44
ERCC1-209ENST00000589214 LCTP09848 1927 aa17.82■□□□□ 0.44
ERCC1-209ENST00000589214 SMCHD1A6NHR9 2005 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 KBTBD13C9JR72 458 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 SNAI1O95863 264 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 ZNF865P0CJ78 1059 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 RARBP10826 455 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 AKR1A1P14550 325 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 TRDNQ13061 729 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 LRRC26Q2I0M4 334 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 GPATCH4Q5T3I0 446 aaKnown RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 MAMDC4Q6UXC1 1216 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 NSMFQ6X4W1 530 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 CHST3Q7LGC8 479 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 ZNF467Q7Z7K2 595 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 ARRDC4Q8NCT1 418 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 XPNPEP3Q9NQH7 507 aa17.81■□□□□ 0.44
ERCC1-209ENST00000589214 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 ZMYND8Q9ULU4 1186 aaPredicted RBP17.81■□□□□ 0.44
ERCC1-209ENST00000589214 HABP4Q5JVS0 413 aaKnown RBP17.8■□□□□ 0.44
ERCC1-209ENST00000589214 IFIT1BQ5T764 474 aaKnown RBP17.8■□□□□ 0.44
ERCC1-209ENST00000589214 ARMCX2Q7L311 632 aa17.8■□□□□ 0.44
ERCC1-209ENST00000589214 FAM133AQ8N9E0 248 aa17.8■□□□□ 0.44
ERCC1-209ENST00000589214 ANKS1AQ92625 1134 aa17.8■□□□□ 0.44
ERCC1-209ENST00000589214 SLC27A2O14975 620 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 SYN1P17600 705 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 ATN1P54259 1190 aaPredicted RBP17.79■□□□□ 0.44
ERCC1-209ENST00000589214 NECTIN1Q15223 517 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 LRRC41Q15345 812 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 CREB3L3Q68CJ9 461 aa17.79■□□□□ 0.44
ERCC1-209ENST00000589214 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
ERCC1-209ENST00000589214 NCOA7Q8NI08 942 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms