RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 CST5P28325 142 aaPredicted RBP13.15□□□□□ -0.3
MRPL54-202ENST00000589174 TDO2P48775 406 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 SMAD3P84022 425 aaKnown RBP13.15□□□□□ -0.3
MRPL54-202ENST00000589174 CCDC144BQ3MJ40 725 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 SLFN13Q68D06 897 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 ZNF467Q7Z7K2 595 aaPredicted RBP13.15□□□□□ -0.3
MRPL54-202ENST00000589174 RNF180Q86T96 592 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 CCDC144CPQ8IYA2 1237 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 MSL3Q8N5Y2 521 aaKnown RBP13.15□□□□□ -0.3
MRPL54-202ENST00000589174 USP38Q8NB14 1042 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
MRPL54-202ENST00000589174 TSEN34Q9BSV6 310 aaKnown RBP13.15□□□□□ -0.3
MRPL54-202ENST00000589174 GRIN2DO15399 1336 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 DUSP11O75319 330 aaKnown RBP13.14□□□□□ -0.31
MRPL54-202ENST00000589174 TTLL1O95922 423 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 ASGR1P07306 291 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 COPB2P35606 906 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 NOVP48745 357 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 GJA9P57773 515 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 NKX3-2P78367 333 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 BEX3Q00994 111 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 TFAP4Q01664 338 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 PPARAQ07869 468 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 MUM1L1Q5H9M0 696 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 DDX11Q96FC9 970 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 TOX2Q96NM4 488 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.14□□□□□ -0.31
MRPL54-202ENST00000589174 A1CFQ9NQ94 594 aaKnown RBP13.14□□□□□ -0.31
MRPL54-202ENST00000589174 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 FEM1BQ9UK73 627 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 FAM184BQ9ULE4 1060 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 CNPY2Q9Y2B0 182 aa13.14□□□□□ -0.31
MRPL54-202ENST00000589174 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 SCN5AQ14524 2016 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 TMEM232C9JQI7 657 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 ZFYP08048 801 aaPredicted RBP13.13□□□□□ -0.31
MRPL54-202ENST00000589174 BMP3P12645 472 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 PBX2P40425 430 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 GRIN2CQ14957 1233 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 RASIP1Q5U651 963 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 KCTD1Q719H9 257 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 FAM126BQ8IXS8 530 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 CHMP4BQ9H444 224 aaKnown RBP13.13□□□□□ -0.31
MRPL54-202ENST00000589174 PDGFCQ9NRA1 345 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 TMEM39AQ9NV64 488 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 GNEQ9Y223 722 aaKnown RBP13.13□□□□□ -0.31
MRPL54-202ENST00000589174 TTC41PQ6P2S7 1318 aa13.13□□□□□ -0.31
MRPL54-202ENST00000589174 MOXD2PA6NHM9 499 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 ZBED4O75132 1171 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 TIMP1P01033 207 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 CD4P01730 458 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 APPP05067 770 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
MRPL54-202ENST00000589174 RAG1P15918 1043 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 GNAT2P19087 354 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 MCCP23508 829 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 TMEM240Q5SV17 173 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 TTBK2Q6IQ55 1244 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 ZNF444Q8N0Y2 327 aaPredicted RBP13.12□□□□□ -0.31
MRPL54-202ENST00000589174 CHST13Q8NET6 341 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 MAFAQ8NHW3 353 aaPredicted RBP13.12□□□□□ -0.31
MRPL54-202ENST00000589174 RNPC3Q96LT9 517 aaKnown RBP13.12□□□□□ -0.31
MRPL54-202ENST00000589174 ABHD16BQ9H3Z7 469 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 MYO9BQ13459 2157 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 CHD9Q3L8U1 2897 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 REV3LO60673 3130 aa13.12□□□□□ -0.31
MRPL54-202ENST00000589174 FGRP09769 529 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 ACRP10323 421 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 CSF2RAP15509 400 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 OAZ1P54368 228 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 FPGSQ05932 587 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 TAPT1Q6NXT6 567 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 ANKRD35Q8N283 1001 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 SLC43A3Q8NBI5 491 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 STAG1Q8WVM7 1258 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 GMCL1Q96IK5 515 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 PRDM6Q9NQX0 595 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 PRR12Q9ULL5 1215 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 ELP1O95163 1332 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 CHD7Q9P2D1 2997 aa13.11□□□□□ -0.31
MRPL54-202ENST00000589174 A0A0D9SFI3 127 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 ARVCFO00192 962 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 TSPY3P0CV98 308 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 TSPY8P0CW00 308 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 SMPD1P17405 629 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 MX1P20591 662 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 DNAJB2P25686 324 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 FAM227BQ96M60 508 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 FSD1Q9BTV5 496 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 PPP1R12CQ9BZL4 782 aa13.1□□□□□ -0.31
MRPL54-202ENST00000589174 NAPBQ9H115 298 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms