RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 KCNJ12Q14500 433 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 SMYD4Q8IYR2 804 aaPredicted RBP15.12■□□□□ 0.01
KDM4B-208ENST00000589104 MMTAG2Q9BU76 263 aaKnown RBP15.12■□□□□ 0.01
KDM4B-208ENST00000589104 PCDHA6Q9UN73 950 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 SIK3Q9Y2K2 1263 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 PCDHA8Q9Y5H6 950 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 PALM3A6NDB9 673 aaPredicted RBP15.12■□□□□ 0.01
KDM4B-208ENST00000589104 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
KDM4B-208ENST00000589104 PJA2O43164 708 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 GALNT17Q6IS24 598 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 NFXL1Q6ZNB6 911 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 RETREG2Q8NC44 543 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 EIF3CQ99613 913 aaKnown RBP15.12■□□□□ 0.01
KDM4B-208ENST00000589104 CUEDC2Q9H467 287 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 ATP8A2Q9NTI2 1148 aa15.12■□□□□ 0.01
KDM4B-208ENST00000589104 PSME4Q14997 1843 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 NKRFO15226 690 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■□□□ 13.5
KDM4B-208ENST00000589104 PAK1Q13153 545 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 CHP1Q99653 195 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 NAPGQ99747 312 aaPredicted RBP15.11■□□□□ 0.01
KDM4B-208ENST00000589104 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
KDM4B-208ENST00000589104 MINPP1Q9UNW1 487 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 TTC26A0AVF1 554 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 STXBP3O00186 592 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 PRDM1O75626 825 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 DGKHQ86XP1 1220 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 HELBQ8NG08 1087 aaPredicted RBP15.11■□□□□ 0.01
KDM4B-208ENST00000589104 PCDHA4Q9UN74 947 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 MYH4Q9Y623 1939 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 ATXN2Q99700 1313 aaKnown RBP15.11■□□□□ 0.01
KDM4B-208ENST00000589104 CDC25AP30304 524 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 ZRSR1Q15695 479 aaKnown RBP15.11■□□□□ 0.01
KDM4B-208ENST00000589104 HDXQ7Z353 690 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 MNS1Q8NEH6 495 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 TSPYL1Q9H0U9 437 aa15.11■□□□□ 0.01
KDM4B-208ENST00000589104 MMGT1Q8N4V1 131 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 RASSF4Q9H2L5 321 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 SF3B2Q13435 895 aaKnown RBP15.1■□□□□ 0.01
KDM4B-208ENST00000589104 FAM71BQ8TC56 605 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
KDM4B-208ENST00000589104 CCDC12Q8WUD4 166 aaPredicted RBP15.1■□□□□ 0.01
KDM4B-208ENST00000589104 HAUS4Q9H6D7 363 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 HPCAL4Q9UM19 191 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
KDM4B-208ENST00000589104 CTAGE9A4FU28 777 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 PARP1P09874 1014 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 MYBP10242 640 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 EPB41P11171 864 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 DYNLL1P63167 89 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 CASP8Q14790 479 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 KARSQ15046 597 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 MED4Q9NPJ6 270 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 RMND1Q9NWS8 449 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 ARPP21Q9UBL0 812 aaPredicted RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 N4BP1O75113 896 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 PIP4K2BP78356 416 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 CREG2Q8IUH2 290 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 CCDC170Q8IYT3 715 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 OLIG1Q8TAK6 271 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 NELFBQ8WX92 580 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 RPGRIP1Q96KN7 1286 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 PAGR1Q9BTK6 254 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 CDCA7Q9BWT1 371 aaPredicted RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 ZMYND12Q9H0C1 365 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 MYO6Q9UM54 1294 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 V9GY48 417 aaPredicted RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 ACTN2P35609 894 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 PPP4CP60510 307 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 C1orf131Q8NDD1 294 aaKnown RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 IQCDQ96DY2 449 aa15.09■□□□□ 0.01
KDM4B-208ENST00000589104 DHTKD1Q96HY7 919 aaPredicted RBP15.09■□□□□ 0.01
KDM4B-208ENST00000589104 ZCWPW2Q504Y3 356 aa15.08■□□□□ 0.01
KDM4B-208ENST00000589104 CENPPQ6IPU0 288 aa15.08■□□□□ 0.01
KDM4B-208ENST00000589104 PDE2AO00408 941 aaPredicted RBP15.08■□□□□ 0
KDM4B-208ENST00000589104 TDO2P48775 406 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 C12orf60Q5U649 245 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 TMEM60Q9H2L4 133 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 SUGCTQ9HAC7 445 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 BARHL2Q9NY43 387 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 GDAQ9Y2T3 454 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 CYP2D7A0A087X1C5 515 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 CYP7A1P22680 504 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 MARSP56192 900 aaKnown RBP15.08■□□□□ 0
KDM4B-208ENST00000589104 MECOMQ03112 1051 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 SRLQ86TD4 932 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 LCMT1Q9UIC8 334 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 EPN1Q9Y6I3 576 aaPredicted RBP15.08■□□□□ 0
KDM4B-208ENST00000589104 GRIN2DO15399 1336 aa15.08■□□□□ 0
KDM4B-208ENST00000589104 KIF5CO60282 957 aa15.07■□□□□ 0
KDM4B-208ENST00000589104 IFIT1BQ5T764 474 aaKnown RBP15.07■□□□□ 0
KDM4B-208ENST00000589104 AK8Q96MA6 479 aa15.07■□□□□ 0
KDM4B-208ENST00000589104 SPZ1Q9BXG8 430 aa15.07■□□□□ 0
KDM4B-208ENST00000589104 COL11A2P13942 1736 aaPredicted RBP15.07■□□□□ 0
KDM4B-208ENST00000589104 ESYT2A0FGR8 921 aa15.07■□□□□ 0
KDM4B-208ENST00000589104 KLRK1P26718 216 aa15.07■□□□□ 0
KDM4B-208ENST00000589104 MIGA1Q8NAN2 632 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms