RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 REV3LO60673 3130 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 FOXP2O15409 715 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 ZBED4O75132 1171 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 GJA9P57773 515 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 NKX3-2P78367 333 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 ARMCX2Q7L311 632 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 CHST13Q8NET6 341 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 NEDD1Q8NHV4 660 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 GPATCH3Q96I76 525 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
CCDC43-204ENST00000588687 ABHD16BQ9H3Z7 469 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 ZNF536O15090 1300 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 ELP1O95163 1332 aa21.97■■□□□ 1.11
CCDC43-204ENST00000588687 PATL2C9JE40 543 aaKnown RBP21.96■■□□□ 1.11
CCDC43-204ENST00000588687 TIMP1P01033 207 aa21.96■■□□□ 1.11
CCDC43-204ENST00000588687 CCDC144BQ3MJ40 725 aa21.96■■□□□ 1.11
CCDC43-204ENST00000588687 FAM133AQ8N9E0 248 aa21.96■■□□□ 1.11
CCDC43-204ENST00000588687 FBXO40Q9UH90 709 aa21.96■■□□□ 1.11
CCDC43-204ENST00000588687 ASTN1O14525 1302 aa21.96■■□□□ 1.11
CCDC43-204ENST00000588687 DCDC2CA8MYV0 355 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 ASGR1P07306 291 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 CNTN2Q02246 1040 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 RASIP1Q5U651 963 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 C16orf59Q7L2K0 433 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 CCDC144CPQ8IYA2 1237 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 ZNF444Q8N0Y2 327 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-204ENST00000588687 ANKRD35Q8N283 1001 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 ZNF287Q9HBT7 754 aa21.95■■□□□ 1.1
CCDC43-204ENST00000588687 XIRP2A4UGR9 3374 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 C6orf222P0C671 652 aaPredicted RBP21.94■■□□□ 1.1
CCDC43-204ENST00000588687 BMP3P12645 472 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 DNAJB2P25686 324 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 SLC4A3P48751 1232 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 SLFN13Q68D06 897 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 MFSD5Q6N075 450 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 FAM126BQ8IXS8 530 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 OTUD7AQ8TE49 926 aaPredicted RBP21.94■■□□□ 1.1
CCDC43-204ENST00000588687 GMCL1Q96IK5 515 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 GLT1D1Q96MS3 346 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC43-204ENST00000588687 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.94■■□□□ 1.1
CCDC43-204ENST00000588687 MROH7Q68CQ1 1323 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 TTC41PQ6P2S7 1318 aa21.94■■□□□ 1.1
CCDC43-204ENST00000588687 FOSL2P15408 326 aa21.93■■□□□ 1.1
CCDC43-204ENST00000588687 ZMYM1Q5SVZ6 1142 aa21.93■■□□□ 1.1
CCDC43-204ENST00000588687 RASGRP2Q7LDG7 609 aa21.93■■□□□ 1.1
CCDC43-204ENST00000588687 PCSK9Q8NBP7 692 aaKnown RBP21.93■■□□□ 1.1
CCDC43-204ENST00000588687 A1CFQ9NQ94 594 aaKnown RBP21.93■■□□□ 1.1
CCDC43-204ENST00000588687 HOMER2Q9NSB8 354 aa21.93■■□□□ 1.1
CCDC43-204ENST00000588687 SALL3Q9BXA9 1300 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 A0A0U1RQG5 324 aaPredicted RBP21.92■■□□□ 1.1
CCDC43-204ENST00000588687 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.92■■□□□ 1.1
CCDC43-204ENST00000588687 APPP05067 770 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 TSPY3P0CV98 308 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 TSPY8P0CW00 308 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 STAT2P52630 851 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 PPARAQ07869 468 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 GRIN2CQ14957 1233 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 ACAD9Q9H845 621 aa21.92■■□□□ 1.1
CCDC43-204ENST00000588687 SOWAHBA6NEL2 793 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 TMEM232C9JQI7 657 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 ARVCFO00192 962 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 FDX1P10109 184 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 TFAP4Q01664 338 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 TMEM240Q5SV17 173 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 SLC43A3Q8NBI5 491 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 AGBL1Q96MI9 1066 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 RNF146Q9NTX7 359 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 GNEQ9Y223 722 aaKnown RBP21.91■■□□□ 1.1
CCDC43-204ENST00000588687 TRANK1O15050 2925 aa21.91■■□□□ 1.1
CCDC43-204ENST00000588687 GBF1Q92538 1859 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.9■■□□□ 1.1
CCDC43-204ENST00000588687 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.9■■□□□ 1.1
CCDC43-204ENST00000588687 PLA2G6O60733 806 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 CD4P01730 458 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 PTGS1P23219 599 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 NOVP48745 357 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 PDE4BQ07343 736 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 GNASQ5JWF2 1037 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 USP38Q8NB14 1042 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 NAPBQ9H115 298 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 IL17RBQ9NRM6 502 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 CTDP1Q9Y5B0 961 aaPredicted RBP21.9■■□□□ 1.1
CCDC43-204ENST00000588687 PCDHB15Q9Y5E8 787 aa21.9■■□□□ 1.1
CCDC43-204ENST00000588687 DDX49Q9Y6V7 483 aaKnown RBP21.9■■□□□ 1.1
CCDC43-204ENST00000588687 CSF2RAP15509 400 aa21.89■■□□□ 1.09
CCDC43-204ENST00000588687 FAM160B2Q86V87 743 aa21.89■■□□□ 1.09
CCDC43-204ENST00000588687 STAG1Q8WVM7 1258 aa21.89■■□□□ 1.09
CCDC43-204ENST00000588687 NACAP1Q9BZK3 213 aa21.89■■□□□ 1.09
CCDC43-204ENST00000588687 SPC25Q9HBM1 224 aa21.89■■□□□ 1.09
CCDC43-204ENST00000588687 GRIN2DO15399 1336 aa21.88■■□□□ 1.09
CCDC43-204ENST00000588687 NMT2O60551 498 aa21.88■■□□□ 1.09
CCDC43-204ENST00000588687 SLC1A4P43007 532 aa21.88■■□□□ 1.09
CCDC43-204ENST00000588687 BEX3Q00994 111 aa21.88■■□□□ 1.09
CCDC43-204ENST00000588687 PPIGQ13427 754 aaKnown RBP eCLIP21.88■■□□□ 1.09
CCDC43-204ENST00000588687 LRRFIP1Q32MZ4 808 aaKnown RBP21.88■■□□□ 1.09
CCDC43-204ENST00000588687 FSD1Q9BTV5 496 aa21.88■■□□□ 1.09
CCDC43-204ENST00000588687 MCCP23508 829 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 PBX2P40425 430 aa21.87■■□□□ 1.09
CCDC43-204ENST00000588687 TKFCQ3LXA3 575 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms