RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CWF19L2Q2TBE0 894 aaKnown RBP8.74□□□□□ -1.01
TPM4-210ENST00000588507 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
TPM4-210ENST00000588507 CXCL17Q6UXB2 119 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SUMF1Q8NBK3 374 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 RETREG2Q8NC44 543 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SMRP1Q8NCR6 262 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 FLCNQ8NFG4 579 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 ZNF594Q96JF6 807 aaPredicted RBP8.74□□□□□ -1.01
TPM4-210ENST00000588507 C12orf42Q96LP6 360 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SPATC1LQ9H0A9 340 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 CHMP3Q9Y3E7 222 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 GRIN2DO15399 1336 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
TPM4-210ENST00000588507 MYO18BQ8IUG5 2567 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 IGF2RP11717 2491 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 COL4A3Q01955 1670 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 SRRM3A6NNA2 597 aaPredicted RBP8.73□□□□□ -1.01
TPM4-210ENST00000588507 NEURL1BA8MQ27 555 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 C1QTNF9BB2RNN3 333 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 LINC01565O15544 149 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 PI15O43692 258 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 IQCF3P0C7M6 154 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 C1QTNF9P0C862 333 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 COASYQ13057 564 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 UNQ6494/PRO21346Q6UXR6 183 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 NCAPG2Q86XI2 1143 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 SECISBP2LQ93073 1101 aaKnown RBP8.73□□□□□ -1.01
TPM4-210ENST00000588507 KIF12Q96FN5 646 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 RTP3Q9BQQ7 232 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 GINM1Q9NU53 330 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 HERC5Q9UII4 1024 aaKnown RBP8.73□□□□□ -1.01
TPM4-210ENST00000588507 ZHX1Q9UKY1 873 aaPredicted RBP8.73□□□□□ -1.01
TPM4-210ENST00000588507 SORCS3Q9UPU3 1222 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 USP15Q9Y4E8 981 aaPredicted RBP8.73□□□□□ -1.01
TPM4-210ENST00000588507 INSL6Q9Y581 213 aa8.73□□□□□ -1.01
TPM4-210ENST00000588507 FRYLO94915 3013 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 CNOT1A5YKK6 2376 aaKnown RBP8.72□□□□□ -1.01
TPM4-210ENST00000588507 SLC30A4O14863 429 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 BRD1O95696 1058 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 LDHBP07195 334 aaKnown RBP8.72□□□□□ -1.01
TPM4-210ENST00000588507 ATF7P17544 494 aaPredicted RBP8.72□□□□□ -1.01
TPM4-210ENST00000588507 KCNA4P22459 653 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 PRDX5P30044 214 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 GTF2F1P35269 517 aaKnown RBP eCLIP8.72□□□□□ -1.011e-6■■■■□ 21.5
TPM4-210ENST00000588507 CCDC57Q2TAC2 916 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 ZNF792Q3KQV3 632 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 CWF19L1Q69YN2 538 aaKnown RBP8.72□□□□□ -1.01
TPM4-210ENST00000588507 FAM117BQ6P1L5 589 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
TPM4-210ENST00000588507 TET1Q8NFU7 2136 aa8.72□□□□□ -1.01
TPM4-210ENST00000588507 CHL1O00533 1208 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 CTAGE5O15320 804 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 NPM3O75607 178 aaKnown RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 PGK2P07205 417 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 CASP7P55210 303 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 NKX3-2P78367 333 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 JAG1P78504 1218 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 BEX3Q00994 111 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 CNGB1Q14028 1251 aaPredicted RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 ZYXQ15942 572 aaKnown RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 N4BP2L1Q5TBK1 243 aaPredicted RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 DUSP27Q5VZP5 1158 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 MSL3Q8N5Y2 521 aaKnown RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 MMP19Q99542 508 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 HOXC10Q9NYD6 342 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 CLEC1BQ9P126 229 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
TPM4-210ENST00000588507 ZNFX1Q9P2E3 1918 aaKnown RBP8.71□□□□□ -1.02
TPM4-210ENST00000588507 PI4KAP2A4QPH2 592 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 TMEM8BA6NDV4 472 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 EIF4E1BA6NMX2 242 aaKnown RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 PITPNM1O00562 1244 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 PER1O15534 1290 aaPredicted RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 KINO60870 393 aaKnown RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 VCAM1P19320 739 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 RBM25P49756 843 aaKnown RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 USP14P54578 494 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 PLS1Q14651 629 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 TMEM192Q8IY95 271 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 PI4KAP1Q8N8J0 262 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 ADAM32Q8TC27 787 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 NETO1Q8TDF5 533 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 RIN2Q8WYP3 895 aaPredicted RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 DDX1Q92499 740 aaKnown RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 PLEKHF1Q96S99 279 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 FEZ1Q99689 392 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 LMAN2LQ9H0V9 348 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 TRMT13Q9NUP7 481 aaKnown RBP8.7□□□□□ -1.02
TPM4-210ENST00000588507 FRYQ5TBA9 3013 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 PTPN13Q12923 2485 aa8.7□□□□□ -1.02
TPM4-210ENST00000588507 TEP1Q99973 2627 aaKnown RBP8.69□□□□□ -1.02
TPM4-210ENST00000588507 ABHD14A-ACY1A0A1B0GW23 586 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 ADCY6O43306 1168 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 ZEB2O60315 1214 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 SNAI1O95863 264 aaPredicted RBP8.69□□□□□ -1.02
TPM4-210ENST00000588507 ARP10275 920 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 PSMC6P62333 389 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 FOXO4P98177 505 aa8.69□□□□□ -1.02
TPM4-210ENST00000588507 ACVR2BQ13705 512 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms