RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 NPLOC4Q8TAT6 608 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 CHMP4CQ96CF2 233 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 DDX11Q96FC9 970 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 TMEM87BQ96K49 555 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 UNC93B1Q9H1C4 597 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 RANBP17Q9H2T7 1088 aaKnown RBP11.82□□□□□ -0.52
TPM4-207ENST00000588032 PAK6Q9NQU5 681 aaPredicted RBP11.82□□□□□ -0.52
TPM4-207ENST00000588032 RIPK3Q9Y572 518 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 ZNF536O15090 1300 aa11.82□□□□□ -0.52
TPM4-207ENST00000588032 FRMPD2Q68DX3 1309 aaPredicted RBP11.82□□□□□ -0.52
TPM4-207ENST00000588032 DOCK3Q8IZD9 2030 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 COBLO75128 1261 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 SGPL1O95470 568 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 IGHA2P01877 340 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 PRKAR2AP13861 404 aaKnown RBP11.81□□□□□ -0.52
TPM4-207ENST00000588032 EN2P19622 333 aaPredicted RBP11.81□□□□□ -0.52
TPM4-207ENST00000588032 SLC16A2P36021 539 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 SLC4A3P48751 1232 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 CCL14Q16627 93 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 TMEM67Q5HYA8 995 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 MSL3Q8N5Y2 521 aaKnown RBP11.81□□□□□ -0.52
TPM4-207ENST00000588032 IGDCC4Q8TDY8 1250 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.81□□□□□ -0.527e-6■■■■□ 23.5
TPM4-207ENST00000588032 ACAD9Q9H845 621 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 TAF6LQ9Y6J9 622 aa11.81□□□□□ -0.52
TPM4-207ENST00000588032 DNAJC25-GNG10A0A024R161 153 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 PRC1O43663 620 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 EIF5BO60841 1220 aaKnown RBP11.8□□□□□ -0.52
TPM4-207ENST00000588032 HMGB1P09429 215 aaKnown RBP11.8□□□□□ -0.52
TPM4-207ENST00000588032 ALAS1P13196 640 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 ANTXR2P58335 489 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 CACNB2Q08289 660 aaPredicted RBP11.8□□□□□ -0.52
TPM4-207ENST00000588032 ZNF792Q3KQV3 632 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 CCDC174Q6PII3 467 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 RASGRP2Q7LDG7 609 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 CATIPQ7Z7H3 387 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 ZNF467Q7Z7K2 595 aaPredicted RBP11.8□□□□□ -0.52
TPM4-207ENST00000588032 ANKRD35Q8N283 1001 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 U2AF1L4Q8WU68 220 aaKnown RBP11.8□□□□□ -0.52
TPM4-207ENST00000588032 MAML3Q96JK9 1138 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 AGBL1Q96MI9 1066 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 TRERF1Q96PN7 1200 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 NEK1Q96PY6 1258 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 MAP3K14Q99558 947 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 MAF1Q9H063 256 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 FLRT1Q9NZU1 646 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 NRBP1Q9UHY1 535 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 CCPG1Q9ULG6 757 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 PLXNB2O15031 1838 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 WDR19Q8NEZ3 1342 aa11.8□□□□□ -0.52
TPM4-207ENST00000588032 ZNF236Q9UL36 1845 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 MSCO60682 206 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 TFRCP02786 760 aaKnown RBP11.79□□□□□ -0.52
TPM4-207ENST00000588032 PGK2P07205 417 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 GOLGA8HP0CJ92 632 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 HSPA4P34932 840 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 LIFRP42702 1097 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 TRIM32Q13049 653 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 CHST3Q7LGC8 479 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 KCNB2Q92953 911 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 DEFB118Q96PH6 123 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 UBA5Q9GZZ9 404 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 RNF146Q9NTX7 359 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 PFASO15067 1338 aa11.79□□□□□ -0.52
TPM4-207ENST00000588032 RBBP6Q7Z6E9 1792 aaKnown RBP11.78□□□□□ -0.52
TPM4-207ENST00000588032 PALM3A6NDB9 673 aaPredicted RBP11.78□□□□□ -0.52
TPM4-207ENST00000588032 CCDC69A6NI79 296 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 KLRF2D3W0D1 207 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 DDAH1O94760 285 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 CALM1P0DP23 149 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 CALM2P0DP24 149 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 CALM3P0DP25 149 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 CYP2C19P33261 490 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 SNAP25P60880 206 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 TROAPQ12815 778 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 TRAF1Q13077 416 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 GRM4Q14833 912 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 MAMDC4Q6UXC1 1216 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 DHX32Q7L7V1 743 aaKnown RBP11.78□□□□□ -0.52
TPM4-207ENST00000588032 ADGRF4Q8IZF3 695 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 TINF2Q9BSI4 451 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 LY9Q9HBG7 655 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 HOMER2Q9NSB8 354 aa11.78□□□□□ -0.52
TPM4-207ENST00000588032 COL11A1P12107 1806 aaPredicted RBP11.78□□□□□ -0.52
TPM4-207ENST00000588032 POTEB2H3BUK9 544 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 DHX16O60231 1041 aaKnown RBP11.77□□□□□ -0.53
TPM4-207ENST00000588032 CYBAP13498 195 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 SMARCA1P28370 1054 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 KIF5BP33176 963 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 GNAQP50148 359 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 NFXL1Q6ZNB6 911 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 RGS22Q8NE09 1264 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 CTCFLQ8NI51 663 aaPredicted RBP11.77□□□□□ -0.53
TPM4-207ENST00000588032 LZTS2Q9BRK4 669 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 A1CFQ9NQ94 594 aaKnown RBP11.77□□□□□ -0.53
TPM4-207ENST00000588032 MAD2L2Q9UI95 211 aa11.77□□□□□ -0.53
TPM4-207ENST00000588032 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms