RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 KCNA10Q16322 511 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 CCSAPQ6IQ19 270 aaPredicted RBP20.03■□□□□ 0.8
SF3A2-203ENST00000587637 MAMDC4Q6UXC1 1216 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 KCTD1Q719H9 257 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 MKL1Q969V6 931 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
SF3A2-203ENST00000587637 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 CDX2Q99626 313 aaPredicted RBP20.03■□□□□ 0.8
SF3A2-203ENST00000587637 KATNBL1Q9H079 304 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 FEM1BQ9UK73 627 aa20.03■□□□□ 0.8
SF3A2-203ENST00000587637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.03■□□□□ 0.8
SF3A2-203ENST00000587637 ZNF536O15090 1300 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 C6orf222P0C671 652 aaPredicted RBP20.02■□□□□ 0.8
SF3A2-203ENST00000587637 BMP3P12645 472 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 MX1P20591 662 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 ACVR2BQ13705 512 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 CCDC144BQ3MJ40 725 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 CCDC174Q6PII3 467 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 ANKRD35Q8N283 1001 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 RNF146Q9NTX7 359 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 TMEM39AQ9NV64 488 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 FAM184BQ9ULE4 1060 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 GBF1Q92538 1859 aa20.02■□□□□ 0.8
SF3A2-203ENST00000587637 CTAGE5O15320 804 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 RAG1P15918 1043 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 MCCP23508 829 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 BEX3Q00994 111 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.01■□□□□ 0.79
SF3A2-203ENST00000587637 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.01■□□□□ 0.79
SF3A2-203ENST00000587637 CCDC144CPQ8IYA2 1237 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 PURBQ96QR8 312 aaKnown RBP20.01■□□□□ 0.79
SF3A2-203ENST00000587637 COL25A1Q9BXS0 654 aaPredicted RBP20.01■□□□□ 0.79
SF3A2-203ENST00000587637 SEMA6BQ9H3T3 888 aa20.01■□□□□ 0.79
SF3A2-203ENST00000587637 A1CFQ9NQ94 594 aaKnown RBP20.01■□□□□ 0.79
SF3A2-203ENST00000587637 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
SF3A2-203ENST00000587637 IKQ13123 557 aaPredicted RBP20■□□□□ 0.79
SF3A2-203ENST00000587637 MUM1L1Q5H9M0 696 aa20■□□□□ 0.79
SF3A2-203ENST00000587637 TMEM63BQ5T3F8 832 aa20■□□□□ 0.79
SF3A2-203ENST00000587637 MSL3Q8N5Y2 521 aaKnown RBP20■□□□□ 0.79
SF3A2-203ENST00000587637 IL17RBQ9NRM6 502 aa20■□□□□ 0.79
SF3A2-203ENST00000587637 TBX21Q9UL17 535 aa20■□□□□ 0.79
SF3A2-203ENST00000587637 SPTBN5Q9NRC6 3674 aaKnown RBP19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ERC2O15083 957 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 DUSP11O75319 330 aaKnown RBP19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ASGR1P07306 291 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 STAT2P52630 851 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 FPGSQ05932 587 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 PDE4BQ07343 736 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ANKRD33Q7Z3H0 272 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ZNF467Q7Z7K2 595 aaPredicted RBP19.99■□□□□ 0.79
SF3A2-203ENST00000587637 FAM133AQ8N9E0 248 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 CHST13Q8NET6 341 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 CRBNQ96SW2 442 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 TSEN34Q9BSV6 310 aaKnown RBP19.99■□□□□ 0.79
SF3A2-203ENST00000587637 NACAP1Q9BZK3 213 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 UPF3AQ9H1J1 476 aaKnown RBP19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ACAD9Q9H845 621 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 STX8Q9UNK0 236 aa19.99■□□□□ 0.79
SF3A2-203ENST00000587637 ALAS1P13196 640 aa19.98■□□□□ 0.79
SF3A2-203ENST00000587637 CST5P28325 142 aaPredicted RBP19.98■□□□□ 0.79
SF3A2-203ENST00000587637 SLC1A4P43007 532 aa19.98■□□□□ 0.79
SF3A2-203ENST00000587637 SMAD3P84022 425 aaKnown RBP19.98■□□□□ 0.79
SF3A2-203ENST00000587637 PPP1R12CQ9BZL4 782 aa19.98■□□□□ 0.79
SF3A2-203ENST00000587637 ZNF287Q9HBT7 754 aa19.98■□□□□ 0.79
SF3A2-203ENST00000587637 A0A0D9SFI3 127 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 MOXD2PA6NHM9 499 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 TSPY2A6NKD2 308 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 OAZ1P54368 228 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 RRP1P56182 461 aaKnown RBP19.97■□□□□ 0.79
SF3A2-203ENST00000587637 TTBK2Q6IQ55 1244 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 EEPD1Q7L9B9 569 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 FBXO16Q8IX29 292 aaPredicted RBP19.97■□□□□ 0.79
SF3A2-203ENST00000587637 MAFAQ8NHW3 353 aaPredicted RBP19.97■□□□□ 0.79
SF3A2-203ENST00000587637 GMCL1Q96IK5 515 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 FAM227BQ96M60 508 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.97■□□□□ 0.799e-8■■■□□ 14.6
SF3A2-203ENST00000587637 PDGFCQ9NRA1 345 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 FBXO40Q9UH90 709 aa19.97■□□□□ 0.79
SF3A2-203ENST00000587637 MYO9BQ13459 2157 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 GRXCR1A8MXD5 290 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 ACRP10323 421 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 GJA9P57773 515 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 CCDC96Q2M329 555 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 STAG1Q8WVM7 1258 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 ABHD16BQ9H3Z7 469 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 PRR12Q9ULL5 1215 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 SYNPO2Q9UMS6 1093 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 UMODL1Q5DID0 1318 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 FRMPD2Q68DX3 1309 aaPredicted RBP19.96■□□□□ 0.79
SF3A2-203ENST00000587637 CHD9Q3L8U1 2897 aa19.96■□□□□ 0.79
SF3A2-203ENST00000587637 LAMA4Q16363 1823 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 DCDC2CA8MYV0 355 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 RANBP6O60518 1105 aaKnown RBP19.95■□□□□ 0.78
SF3A2-203ENST00000587637 SLC16A2P36021 539 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 GNASQ5JWF2 1037 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 CXCL17Q6UXB2 119 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 C16orf59Q7L2K0 433 aa19.95■□□□□ 0.78
SF3A2-203ENST00000587637 ZNF589Q86UQ0 364 aaPredicted RBP19.95■□□□□ 0.78
SF3A2-203ENST00000587637 FAM160B2Q86V87 743 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms