RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 CAPN2P17655 700 aa27.55■■■□□ 2
CHAF1A-205ENST00000587580 CASC1Q6TDU7 716 aa27.55■■■□□ 2
CHAF1A-205ENST00000587580 STOX1Q6ZVD7 989 aa27.55■■■□□ 2
CHAF1A-205ENST00000587580 NCOA7Q8NI08 942 aa27.55■■■□□ 2
CHAF1A-205ENST00000587580 PDE4DIPQ5VU43 2346 aa27.55■■■□□ 2
CHAF1A-205ENST00000587580 ZNF792Q3KQV3 632 aa27.54■■■□□ 2
CHAF1A-205ENST00000587580 IFIT1BQ5T764 474 aaKnown RBP27.54■■■□□ 2
CHAF1A-205ENST00000587580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.54■■■□□ 2
CHAF1A-205ENST00000587580 DDX11Q96FC9 970 aa27.54■■■□□ 2
CHAF1A-205ENST00000587580 RANBP17Q9H2T7 1088 aaKnown RBP27.54■■■□□ 2
CHAF1A-205ENST00000587580 FRMPD3Q5JV73 1810 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 CYBAP13498 195 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 GPATCH4Q5T3I0 446 aaKnown RBP27.53■■■□□ 2
CHAF1A-205ENST00000587580 ERICH6BQ5W0A0 696 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 ANKRD35Q8N283 1001 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 ACAD9Q9H845 621 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 RNF146Q9NTX7 359 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 PPP4R2Q9NY27 417 aa27.53■■■□□ 2
CHAF1A-205ENST00000587580 DIS3Q9Y2L1 958 aaKnown RBP27.53■■■□□ 2
CHAF1A-205ENST00000587580 MKI67P46013 3256 aaKnown RBP27.52■■■□□ 2
CHAF1A-205ENST00000587580 GOLGA8HP0CJ92 632 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 ALAS1P13196 640 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 CNGA1P29973 690 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 SEC23AQ15436 765 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 TKFCQ3LXA3 575 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 UBE2Q1Q7Z7E8 422 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 CCPG1Q9ULG6 757 aa27.52■■■□□ 2
CHAF1A-205ENST00000587580 ICAM1P05362 532 aa27.51■■□□□ 1.99
CHAF1A-205ENST00000587580 TRPV1Q8NER1 839 aa27.51■■□□□ 1.99
CHAF1A-205ENST00000587580 TRERF1Q96PN7 1200 aa27.51■■□□□ 1.99
CHAF1A-205ENST00000587580 DNAJC25-GNG10A0A024R161 153 aa27.5■■□□□ 1.99
CHAF1A-205ENST00000587580 IFIT3O14879 490 aaKnown RBP27.5■■□□□ 1.99
CHAF1A-205ENST00000587580 TAL1P17542 331 aaPredicted RBP27.5■■□□□ 1.99
CHAF1A-205ENST00000587580 OGDHLQ9ULD0 1010 aa27.5■■□□□ 1.99
CHAF1A-205ENST00000587580 ERICH2A1L162 156 aa27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 SLC27A2O14975 620 aa27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 ASPRV1Q53RT3 343 aa27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 MB21D2Q8IYB1 491 aaPredicted RBP27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 ANKLE1Q8NAG6 615 aa27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 TINF2Q9BSI4 451 aa27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 DDX20Q9UHI6 824 aaKnown RBP27.49■■□□□ 1.99
CHAF1A-205ENST00000587580 PARP1P09874 1014 aaKnown RBP27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 SART3Q15020 963 aaKnown RBP27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 PRAMEF19Q5SWL8 479 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 CREB3L3Q68CJ9 461 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 LHX8Q68G74 356 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 CHST3Q7LGC8 479 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 DIS3LQ8TF46 1054 aaKnown RBP27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 UBA5Q9GZZ9 404 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 CPVLQ9H3G5 476 aa27.48■■□□□ 1.99
CHAF1A-205ENST00000587580 SMCHD1A6NHR9 2005 aa27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 MSCO60682 206 aa27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 ANTXR2P58335 489 aa27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 NECTIN1Q15223 517 aa27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 MUM1L1Q5H9M0 696 aa27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 PAWRQ96IZ0 340 aaKnown RBP27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 A1CFQ9NQ94 594 aaKnown RBP27.47■■□□□ 1.99
CHAF1A-205ENST00000587580 WTAPQ15007 396 aa27.46■■□□□ 1.99
CHAF1A-205ENST00000587580 PFASO15067 1338 aa27.45■■□□□ 1.99
CHAF1A-205ENST00000587580 NECAB2Q7Z6G3 386 aa27.45■■□□□ 1.98
CHAF1A-205ENST00000587580 MSL3Q8N5Y2 521 aaKnown RBP27.45■■□□□ 1.98
CHAF1A-205ENST00000587580 HTATIP2Q9BUP3 242 aa27.45■■□□□ 1.98
CHAF1A-205ENST00000587580 SENP2Q9HC62 589 aa27.45■■□□□ 1.98
CHAF1A-205ENST00000587580 NRBP1Q9UHY1 535 aa27.45■■□□□ 1.98
CHAF1A-205ENST00000587580 WDR19Q8NEZ3 1342 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 POTEB2H3BUK9 544 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 SEPT4O43236 478 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 TMEM67Q5HYA8 995 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 NSMFQ6X4W1 530 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 ZNF467Q7Z7K2 595 aaPredicted RBP27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 FGD4Q96M96 766 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 PNMA2Q9UL42 364 aa27.44■■□□□ 1.98
CHAF1A-205ENST00000587580 SYNGAP1Q96PV0 1343 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 MNX1P50219 401 aaPredicted RBP27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 CNTN2Q02246 1040 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 CDC37Q16543 378 aaPredicted RBP27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 PRPF38BQ5VTL8 546 aaKnown RBP27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 RNF20Q5VTR2 975 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 ANO1Q5XXA6 986 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 MAMDC4Q6UXC1 1216 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 ADGRF4Q8IZF3 695 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 CNPY2Q9Y2B0 182 aa27.43■■□□□ 1.98
CHAF1A-205ENST00000587580 DHX16O60231 1041 aaKnown RBP27.42■■□□□ 1.98
CHAF1A-205ENST00000587580 STAG2Q8N3U4 1231 aa27.42■■□□□ 1.98
CHAF1A-205ENST00000587580 FAM133AQ8N9E0 248 aa27.42■■□□□ 1.98
CHAF1A-205ENST00000587580 MCM3APO60318 1980 aa27.42■■□□□ 1.98
CHAF1A-205ENST00000587580 NFIBO00712 420 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 PRC1O43663 620 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 MCM5P33992 734 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 IGDCC4Q8TDY8 1250 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 DPF3Q92784 378 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 C11orf49Q9H6J7 331 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 CYP39A1Q9NYL5 469 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 MAD2L2Q9UI95 211 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 LCTP09848 1927 aa27.41■■□□□ 1.98
CHAF1A-205ENST00000587580 MYH6P13533 1939 aa27.4■■□□□ 1.98
CHAF1A-205ENST00000587580 SNAI1O95863 264 aaPredicted RBP27.4■■□□□ 1.98
CHAF1A-205ENST00000587580 ZNF865P0CJ78 1059 aaPredicted RBP27.4■■□□□ 1.98
CHAF1A-205ENST00000587580 GRM4Q14833 912 aa27.4■■□□□ 1.98
CHAF1A-205ENST00000587580 USH1GQ495M9 461 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms