RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.94□□□□□ -0.82
NEDD4L-218ENST00000587547 MKNK2Q9HBH9 465 aa9.94□□□□□ -0.82
NEDD4L-218ENST00000587547 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.94□□□□□ -0.82
NEDD4L-218ENST00000587547 SLC45A1Q9Y2W3 748 aa9.94□□□□□ -0.82
NEDD4L-218ENST00000587547 TACC3Q9Y6A5 838 aa9.94□□□□□ -0.82
NEDD4L-218ENST00000587547 NEDD4P46934 1319 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 A6NJR5 290 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 E7EWF7 191 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 EPB41L2O43491 1005 aaKnown RBP9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 PTPRAP18433 802 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 CDK8P49336 464 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 PSEN2P49810 448 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 PDE4BQ07343 736 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 SHHQ15465 462 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 AKNAD1Q5T1N1 836 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 TREML2Q5T2D2 321 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 STOX1Q6ZVD7 989 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 C16orf86Q6ZW13 317 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 CCDC84Q86UT8 332 aaPredicted RBP9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 FOXP4Q8IVH2 680 aaPredicted RBP9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 ZBED2Q9BTP6 218 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 EHD4Q9H223 541 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 RNF41Q9H4P4 317 aaPredicted RBP9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 DNAJC18Q9H819 358 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 KIAA1468Q9P260 1216 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 ANAPC4Q9UJX5 808 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 SNX14Q9Y5W7 946 aa9.93□□□□□ -0.82
NEDD4L-218ENST00000587547 TRIM75PA6NK02 468 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 B4E1Z4 1266 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 MPHOSPH10O00566 681 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 GDF11O95390 407 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 SHMT1P34896 483 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 RFC5P40937 340 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 GABPAQ06546 454 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 TRDNQ13061 729 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 RALYLQ86SE5 291 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 SCYL3Q8IZE3 742 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 STAG1Q8WVM7 1258 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 JAKMIP1Q96N16 626 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 SWAP70Q9UH65 585 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 DNAH12Q6ZR08 3092 aa9.92□□□□□ -0.82
NEDD4L-218ENST00000587547 SPTLC1O15269 473 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 KDM4AO75164 1064 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 AKR1B1P15121 316 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 CYP2B6P20813 491 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 RASA1P20936 1047 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 KRT32Q14532 448 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 ADCK5Q3MIX3 580 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 CERKLQ49MI3 558 aaPredicted RBP9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 FAM47AQ5JRC9 791 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 LHX8Q68G74 356 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 ZNF444Q8N0Y2 327 aaPredicted RBP9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 NCOA7Q8NI08 942 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 KCNB2Q92953 911 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 TBC1D32Q96NH3 1257 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 ARID3AQ99856 593 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 KRT23Q9C075 422 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 CNNM2Q9H8M5 875 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 ZNF287Q9HBT7 754 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 PICK1Q9NRD5 415 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 LTBP2Q14767 1821 aa9.91□□□□□ -0.82
NEDD4L-218ENST00000587547 MOXD2PA6NHM9 499 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 TSPY2A6NKD2 308 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 ORC4O43929 436 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 PEX10O60683 326 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 CPA1P15085 419 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 CASTP20810 708 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 CCND3P30281 292 aaPredicted RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 SMAD3P84022 425 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 TFAP4Q01664 338 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 CACNB2Q08289 660 aaPredicted RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 RRP1BQ14684 758 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 ABCB5Q2M3G0 1257 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 SHROOM1Q2M3G4 852 aaPredicted RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 PPP2R2DQ66LE6 453 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 CHST3Q7LGC8 479 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 METTL16Q86W50 562 aaKnown RBP9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 ESR2Q92731 530 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 NEK1Q96PY6 1258 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 PLXNB2O15031 1838 aa9.9□□□□□ -0.82
NEDD4L-218ENST00000587547 GH2P01242 217 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 FGRP09769 529 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 PCP11498 1178 aaKnown RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 PSMA5P28066 241 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 RBM25P49756 843 aaKnown RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 ANAPC15P60006 121 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 MAP3K10Q02779 954 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 COL9A3Q14050 684 aaPredicted RBP9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 GRIN2CQ14957 1233 aa9.89□□□□□ -0.83
NEDD4L-218ENST00000587547 TSGA10IPQ3SY00 556 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms