RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 ACAD9Q9H845 621 aa16.43■□□□□ 0.22
TPM4-205ENST00000586833 LY9Q9HBG7 655 aa16.43■□□□□ 0.22
TPM4-205ENST00000586833 SNX14Q9Y5W7 946 aa16.43■□□□□ 0.22
TPM4-205ENST00000586833 HOXC6P09630 235 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 GOLGA8HP0CJ92 632 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 ADORA2AP29274 412 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 GRM4Q14833 912 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 ZNF654Q8IZM8 581 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 SH3TC2Q8TF17 1288 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 CASP8AP2Q9UKL3 1982 aa16.42■□□□□ 0.22
TPM4-205ENST00000586833 KLRF2D3W0D1 207 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 ALAS1P13196 640 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 SGMS1Q86VZ5 419 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 USP6NLQ92738 828 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 TRERF1Q96PN7 1200 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 UBA5Q9GZZ9 404 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 RNF146Q9NTX7 359 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 DIS3Q9Y2L1 958 aaKnown RBP16.41■□□□□ 0.22
TPM4-205ENST00000586833 CYP46A1Q9Y6A2 500 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 PFASO15067 1338 aa16.41■□□□□ 0.22
TPM4-205ENST00000586833 PALM3A6NDB9 673 aaPredicted RBP16.4■□□□□ 0.22
TPM4-205ENST00000586833 INHAP05111 366 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 CASTP20810 708 aaKnown RBP16.4■□□□□ 0.22
TPM4-205ENST00000586833 ANAPC15P60006 121 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 TROAPQ12815 778 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 CDC37Q16543 378 aaPredicted RBP16.4■□□□□ 0.22
TPM4-205ENST00000586833 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.4■□□□□ 0.223e-7■□□□□ 8.7
TPM4-205ENST00000586833 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 ADGRF4Q8IZF3 695 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 AGBL1Q96MI9 1066 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 TM6SF1Q9BZW5 370 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 MAF1Q9H063 256 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 UPF2Q9HAU5 1272 aaKnown RBP16.4■□□□□ 0.22
TPM4-205ENST00000586833 HOMER2Q9NSB8 354 aa16.4■□□□□ 0.22
TPM4-205ENST00000586833 RBM28Q9NW13 759 aaKnown RBP16.4■□□□□ 0.22
TPM4-205ENST00000586833 CCDC196A0A1B0GTZ2 297 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 ELNP15502 786 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 RPS6KB1P23443 525 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 SMARCA1P28370 1054 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 RCAN1P53805 252 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
TPM4-205ENST00000586833 PPP2R5BQ15173 497 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 ADCK5Q3MIX3 580 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 OLFML2BQ68BL8 750 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 MSL3Q8N5Y2 521 aaKnown RBP16.39■□□□□ 0.21
TPM4-205ENST00000586833 MPHOSPH6Q99547 160 aaKnown RBP16.39■□□□□ 0.21
TPM4-205ENST00000586833 VAT1LQ9HCJ6 419 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 SEC63Q9UGP8 760 aaKnown RBP16.39■□□□□ 0.21
TPM4-205ENST00000586833 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 NAP1L2Q9ULW6 460 aaPredicted RBP16.39■□□□□ 0.21
TPM4-205ENST00000586833 GTF3C3Q9Y5Q9 886 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 ABCB11O95342 1321 aa16.39■□□□□ 0.21
TPM4-205ENST00000586833 POTEB2H3BUK9 544 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 ZBTB43O43298 467 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 CAPN15O75808 1086 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 SNAP25P60880 206 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 MCF2L2Q86YR7 1114 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 AMNQ9BXJ7 453 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 LRRC2Q9BYS8 371 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 RNF208Q9H0X6 261 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 HMX1Q9NP08 348 aaPredicted RBP16.38■□□□□ 0.21
TPM4-205ENST00000586833 MRPL11Q9Y3B7 192 aaKnown RBP16.38■□□□□ 0.21
TPM4-205ENST00000586833 RIPK3Q9Y572 518 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 ZNF536O15090 1300 aa16.38■□□□□ 0.21
TPM4-205ENST00000586833 B4DLN1 442 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 ZBTB5O15062 677 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 MRPL12P52815 198 aaKnown RBP16.37■□□□□ 0.21
TPM4-205ENST00000586833 Q6ZUG5 572 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 MICU3Q86XE3 530 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 TRIB2Q92519 343 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 RRP36Q96EU6 259 aaKnown RBP16.37■□□□□ 0.21
TPM4-205ENST00000586833 JMJD4Q9H9V9 463 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 NRBP1Q9UHY1 535 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 RPTORQ8N122 1335 aa16.37■□□□□ 0.21
TPM4-205ENST00000586833 KLF18A0A0U1RQI7 1052 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 CCL5P13501 91 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 NSMFQ6X4W1 530 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 ZNF467Q7Z7K2 595 aaPredicted RBP16.36■□□□□ 0.21
TPM4-205ENST00000586833 STAG2Q8N3U4 1231 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 FBXL16Q8N461 479 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 FANCBQ8NB91 859 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 SENP2Q9HC62 589 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 ZSWIM6Q9HCJ5 1215 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 ADD3Q9UEY8 706 aaKnown RBP16.36■□□□□ 0.21
TPM4-205ENST00000586833 CNPY2Q9Y2B0 182 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 A0A0G2JMZ2 1700 aa16.36■□□□□ 0.21
TPM4-205ENST00000586833 PTPDC1A2A3K4 754 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 GOLGA8BA8MQT2 603 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 MSCO60682 206 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 COBLO75128 1261 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
TPM4-205ENST00000586833 PRKAR2AP13861 404 aaKnown RBP16.35■□□□□ 0.21
TPM4-205ENST00000586833 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
TPM4-205ENST00000586833 RTN1Q16799 776 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms