RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 PLA2G6O60733 806 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 XBP1P17861 261 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 FAM160B2Q86V87 743 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 FBXO18Q8NFZ0 1043 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 HOXC10Q9NYD6 342 aa20.59■□□□□ 0.89
RBFOX1-222ENST00000585867 PPFIA3O75145 1194 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 CYP2C8P10632 490 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 CSPP1Q1MSJ5 1256 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 BTNL9Q6UXG8 535 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 PRPF38AQ8NAV1 312 aaKnown RBP20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 KIFC2Q96AC6 838 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 SLF1Q9BQI6 1058 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 CPVLQ9H3G5 476 aa20.58■□□□□ 0.88
RBFOX1-222ENST00000585867 CNTNAP5Q8WYK1 1306 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 PLEKHA8P1O95397 391 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 ALDH1A1P00352 501 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 SMARCA1P28370 1054 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 DSG3P32926 999 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 FUT2Q10981 343 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 TAF1CQ15572 869 aaPredicted RBP20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 PPP1R9AQ9ULJ8 1098 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 THSD7BQ9C0I4 1608 aa20.57■□□□□ 0.88
RBFOX1-222ENST00000585867 FOSBP53539 338 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 RESTQ13127 1097 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 SYDE2Q5VT97 1194 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 CMTR1Q8N1G2 835 aaKnown RBP20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 PARK7Q99497 189 aaKnown RBP20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 VAT1LQ9HCJ6 419 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 PRR12Q9ULL5 1215 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 MYPNQ86TC9 1320 aa20.56■□□□□ 0.88
RBFOX1-222ENST00000585867 SPDYE16A6NNV3 312 aaPredicted RBP20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 HERVK_113P62684 666 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 FERMT3Q86UX7 667 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 CCDC82Q8N4S0 544 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 SRBD1Q8N5C6 995 aaKnown RBP20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 SMCR8Q8TEV9 937 aaPredicted RBP20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 ATG4CQ96DT6 458 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 SAFBQ15424 915 aaKnown RBP eCLIP20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 ADGRF4Q8IZF3 695 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 SPZ1Q9BXG8 430 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 ZFYVE28Q9HCC9 887 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 RNF186Q9NXI6 227 aa20.55■□□□□ 0.88
RBFOX1-222ENST00000585867 RLFQ13129 1914 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 CA12O43570 354 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 KRT85P78386 507 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 GUCY1B3Q02153 619 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 ATL3Q6DD88 541 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 BRAPQ7Z569 592 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 FAM177A1Q8N128 213 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 RIOX1Q9H6W3 641 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 ADAMTS5Q9UNA0 930 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 V9GY48 417 aaPredicted RBP20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 PARP14Q460N5 1801 aa20.54■□□□□ 0.88
RBFOX1-222ENST00000585867 VWA5AO00534 786 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 ZBED4O75132 1171 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 SNAP25P60880 206 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 MAP2K1Q02750 393 aaPredicted RBP20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 CRHR2Q13324 411 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 SLC35G1Q2M3R5 365 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 KRT40Q6A162 431 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 LBX2Q6XYB7 198 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 JMJD4Q9H9V9 463 aa20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 CTDP1Q9Y5B0 961 aaPredicted RBP20.53■□□□□ 0.88
RBFOX1-222ENST00000585867 TCHHQ07283 1943 aa20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 CYTH3O43739 400 aa20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 TRPA1O75762 1119 aa20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 FDX1P10109 184 aa20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 SKOR2Q2VWA4 1001 aaPredicted RBP20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 POTEEQ6S8J3 1075 aa20.52■□□□□ 0.88
RBFOX1-222ENST00000585867 TLR2O60603 784 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 SCG2P13521 617 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 GCLCP48506 637 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 GNL2Q13823 731 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 PFKFB3Q16875 520 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 FOXD4L6Q3SYB3 417 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 FOXD4L3Q6VB84 417 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 TMEM87AQ8NBN3 555 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 GTF3C2Q8WUA4 911 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 ZNF396Q96N95 335 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 AIFM3Q96NN9 605 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 PAGR1Q9BTK6 254 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 ANP32EQ9BTT0 268 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 SLC38A10Q9HBR0 1119 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 RBPJLQ9UBG7 517 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 CFAP45Q9UL16 551 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 TBC1D8O95759 1140 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 MMP1P03956 469 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 NCLP19338 710 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 DNM1Q05193 864 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 PKN1Q16512 942 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 MB21D1Q8N884 522 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 PIBF1Q8WXW3 757 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 PIGSQ96S52 555 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 BEGAINQ9BUH8 593 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 SCAND2PQ9GZW5 306 aaPredicted RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 RANBP17Q9H2T7 1088 aaKnown RBP20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 BRMS1Q9HCU9 246 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 SH3GLB2Q9NR46 395 aa20.51■□□□□ 0.87
RBFOX1-222ENST00000585867 BTBD7Q9P203 1132 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms