RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 SLF1Q9BQI6 1058 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 SPZ1Q9BXG8 430 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 RNF26Q9BY78 433 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-215ENST00000585741 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
HMG20B-215ENST00000585741 ORC3Q9UBD5 711 aaPredicted RBP19.58■□□□□ 0.72
HMG20B-215ENST00000585741 KIAA0100Q14667 2235 aaKnown RBP19.57■□□□□ 0.72
HMG20B-215ENST00000585741 FMNL1O95466 1100 aaPredicted RBP19.57■□□□□ 0.72
HMG20B-215ENST00000585741 OSBPP22059 807 aa19.57■□□□□ 0.72
HMG20B-215ENST00000585741 GJB2P29033 226 aa19.57■□□□□ 0.72
HMG20B-215ENST00000585741 ST3GAL1Q11201 340 aa19.57■□□□□ 0.72
HMG20B-215ENST00000585741 HOMER1Q86YM7 354 aa19.57■□□□□ 0.72
HMG20B-215ENST00000585741 FAM43AQ8N2R8 423 aa19.57■□□□□ 0.72
HMG20B-215ENST00000585741 PRPF38AQ8NAV1 312 aaKnown RBP19.57■□□□□ 0.72
HMG20B-215ENST00000585741 CWC22Q9HCG8 908 aaKnown RBP19.57■□□□□ 0.72
HMG20B-215ENST00000585741 V9GY48 417 aaPredicted RBP19.57■□□□□ 0.72
HMG20B-215ENST00000585741 PRPF3O43395 683 aaKnown RBP19.56■□□□□ 0.72
HMG20B-215ENST00000585741 JAK2O60674 1132 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 PLA2G6O60733 806 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 DEXIO95424 95 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 XBP1P17861 261 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 NTRK3Q16288 839 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 ADGRF4Q8IZF3 695 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 CPVLQ9H3G5 476 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 PNMA3Q9UL41 463 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 AGTPBP1Q9UPW5 1226 aa19.56■□□□□ 0.72
HMG20B-215ENST00000585741 CNTNAP5Q8WYK1 1306 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 STK36Q9NRP7 1315 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 ZBED4O75132 1171 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 CTDNEP1O95476 244 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 PDCP20941 246 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 TRIM29Q14134 588 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 COG2Q14746 738 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 CATSPERGQ6ZRH7 1159 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 RIOX1Q9H6W3 641 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 HOXC10Q9NYD6 342 aa19.55■□□□□ 0.72
HMG20B-215ENST00000585741 PHIPQ8WWQ0 1821 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 FDX1P10109 184 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 EN2P19622 333 aaPredicted RBP19.54■□□□□ 0.72
HMG20B-215ENST00000585741 TRAF1Q13077 416 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 TREML2Q5T2D2 321 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 NBPF11Q86T75 865 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 ZNF333Q96JL9 665 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 PIGSQ96S52 555 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 ALG1Q9BT22 464 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 PRR12Q9ULL5 1215 aa19.54■□□□□ 0.72
HMG20B-215ENST00000585741 PNMA6FA0A0J9YX94 578 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 hCG_1642624A0A1W2PR95 340 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 ZBTB5O15062 677 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 TAF1CQ15572 869 aaPredicted RBP19.53■□□□□ 0.72
HMG20B-215ENST00000585741 CDC37Q16543 378 aaPredicted RBP19.53■□□□□ 0.72
HMG20B-215ENST00000585741 JMJD4Q9H9V9 463 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 ZFYVE28Q9HCC9 887 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 FBXO28Q9NVF7 368 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 PPP1R9AQ9ULJ8 1098 aa19.53■□□□□ 0.72
HMG20B-215ENST00000585741 H3BQV1 296 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 CYTH3O43739 400 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 DTNBO60941 627 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 HOXA7P31268 230 aaPredicted RBP19.52■□□□□ 0.72
HMG20B-215ENST00000585741 DSG3P32926 999 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 FUT2Q10981 343 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 LARP1BQ659C4 914 aaKnown RBP19.52■□□□□ 0.72
HMG20B-215ENST00000585741 HEATR3Q7Z4Q2 680 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 ANKRD23Q86SG2 305 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 CCDC12Q8WUD4 166 aaPredicted RBP19.52■□□□□ 0.72
HMG20B-215ENST00000585741 PNMA2Q9UL42 364 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 PTCH2Q9Y6C5 1203 aa19.52■□□□□ 0.72
HMG20B-215ENST00000585741 MYPNQ86TC9 1320 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 hCG_1984214I3L0E3 225 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 SCG2P13521 617 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 FOSBP53539 338 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 CCDC174Q6PII3 467 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 ZNF713Q8N859 430 aaPredicted RBP19.51■□□□□ 0.71
HMG20B-215ENST00000585741 SMCR8Q8TEV9 937 aaPredicted RBP19.51■□□□□ 0.71
HMG20B-215ENST00000585741 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 ARHGAP39Q9C0H5 1083 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 ZSWIM8A7E2V4 1837 aa19.51■□□□□ 0.71
HMG20B-215ENST00000585741 PDHXO00330 501 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 TLR2O60603 784 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 PDIA4P13667 645 aaKnown RBP19.5■□□□□ 0.71
HMG20B-215ENST00000585741 SNAP25P60880 206 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 PFKFB3Q16875 520 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-215ENST00000585741 QRICH1Q2TAL8 776 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 CCDC148Q8NFR7 591 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 GTF3C2Q8WUA4 911 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-215ENST00000585741 ATG4CQ96DT6 458 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 AMNQ9BXJ7 453 aa19.5■□□□□ 0.71
HMG20B-215ENST00000585741 ASCC2Q9H1I8 757 aaPredicted RBP19.5■□□□□ 0.71
HMG20B-215ENST00000585741 NAPAP54920 295 aa19.49■□□□□ 0.71
HMG20B-215ENST00000585741 GNL2Q13823 731 aaKnown RBP19.49■□□□□ 0.71
HMG20B-215ENST00000585741 GPAT2Q6NUI2 795 aa19.49■□□□□ 0.71
HMG20B-215ENST00000585741 CPXCR1Q8N123 301 aa19.49■□□□□ 0.71
HMG20B-215ENST00000585741 MB21D1Q8N884 522 aa19.49■□□□□ 0.71
HMG20B-215ENST00000585741 PARK7Q99497 189 aaKnown RBP19.49■□□□□ 0.71
HMG20B-215ENST00000585741 RANBP17Q9H2T7 1088 aaKnown RBP19.49■□□□□ 0.71
HMG20B-215ENST00000585741 BRMS1Q9HCU9 246 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms