RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 CCND3P30281 292 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-202ENST00000585437 KCTD2Q14681 263 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 CCDC96Q2M329 555 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 GPATCH4Q5T3I0 446 aaKnown RBP10.13□□□□□ -0.79
ATG4D-202ENST00000585437 MFSD14CQ5VZR4 134 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 LHX8Q68G74 356 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 ZNF467Q7Z7K2 595 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-202ENST00000585437 MB21D2Q8IYB1 491 aaPredicted RBP10.13□□□□□ -0.79
ATG4D-202ENST00000585437 CPXCR1Q8N123 301 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 PNMA1Q8ND90 353 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 TRPV1Q8NER1 839 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 FGD4Q96M96 766 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 UPF2Q9HAU5 1272 aaKnown RBP10.13□□□□□ -0.79
ATG4D-202ENST00000585437 SLC5A4Q9NY91 659 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 FBXO40Q9UH90 709 aa10.13□□□□□ -0.79
ATG4D-202ENST00000585437 FRMPD2Q68DX3 1309 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-202ENST00000585437 WDR19Q8NEZ3 1342 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 CDC45O75419 566 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 FARP2O94887 1054 aaPredicted RBP10.12□□□□□ -0.79
ATG4D-202ENST00000585437 ICAM1P05362 532 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 PGK2P07205 417 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 CYP2C19P33261 490 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 ANTXR2P58335 489 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 NECTIN1Q15223 517 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 TKFCQ3LXA3 575 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 SYDE2Q5VT97 1194 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 TTBK2Q6IQ55 1244 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 MAMDC4Q6UXC1 1216 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 MSL3Q8N5Y2 521 aaKnown RBP10.12□□□□□ -0.79
ATG4D-202ENST00000585437 NCOA7Q8NI08 942 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 AGBL1Q96MI9 1066 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 UBAC1Q9BSL1 405 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 ACAD9Q9H845 621 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 NRBP1Q9UHY1 535 aa10.12□□□□□ -0.79
ATG4D-202ENST00000585437 SYNGAP1Q96PV0 1343 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 MSCO60682 206 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 SLC16A2P36021 539 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 TRDNQ13061 729 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 IKQ13123 557 aaPredicted RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 ASPRV1Q53RT3 343 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 PRPF38BQ5VTL8 546 aaKnown RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 FAM133AQ8N9E0 248 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 CHMP4CQ96CF2 233 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 TINF2Q9BSI4 451 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 MTA3Q9BTC8 594 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 KAT14Q9H8E8 782 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 A1CFQ9NQ94 594 aaKnown RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 RNF146Q9NTX7 359 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 DDX20Q9UHI6 824 aaKnown RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
ATG4D-202ENST00000585437 BAZ2BQ9UIF8 2168 aaKnown RBP10.11□□□□□ -0.79
ATG4D-202ENST00000585437 ASTN1O14525 1302 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 PFASO15067 1338 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 SLC27A2O14975 620 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 SEPT4O43236 478 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 TFRCP02786 760 aaKnown RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 COL6A1P12109 1028 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 SNAP25P60880 206 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 COL9A3Q14050 684 aaPredicted RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 MUM1L1Q5H9M0 696 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 IFIT1BQ5T764 474 aaKnown RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 KIAA1211Q6ZU35 1233 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 RALYLQ86SE5 291 aaKnown RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 DIS3LQ8TF46 1054 aaKnown RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 TRERF1Q96PN7 1200 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 GPCPD1Q9NPB8 672 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 ANO2Q9NQ90 1003 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 HOMER2Q9NSB8 354 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 PNMA2Q9UL42 364 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 CCPG1Q9ULG6 757 aa10.1□□□□□ -0.79
ATG4D-202ENST00000585437 ISY1Q9ULR0 285 aaKnown RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 CTDP1Q9Y5B0 961 aaPredicted RBP10.1□□□□□ -0.79
ATG4D-202ENST00000585437 CEP290O15078 2479 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 PALM3A6NDB9 673 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-202ENST00000585437 SNAI1O95863 264 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-202ENST00000585437 ZNF865P0CJ78 1059 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-202ENST00000585437 GOLGA8HP0CJ92 632 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 ALAS1P13196 640 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 TAL1P17542 331 aaPredicted RBP10.09□□□□□ -0.79
ATG4D-202ENST00000585437 TROAPQ12815 778 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 CREB3L3Q68CJ9 461 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 ANKRD35Q8N283 1001 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 IGDCC4Q8TDY8 1250 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 CLEC4DQ8WXI8 215 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 MTMR8Q96EF0 704 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 DDX11Q96FC9 970 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 PAWRQ96IZ0 340 aaKnown RBP10.09□□□□□ -0.79
ATG4D-202ENST00000585437 KATNBL1Q9H079 304 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 CPVLQ9H3G5 476 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 SENP2Q9HC62 589 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 CYP39A1Q9NYL5 469 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
ATG4D-202ENST00000585437 SOWAHBA6NEL2 793 aa10.08□□□□□ -0.8
ATG4D-202ENST00000585437 NFIBO00712 420 aa10.08□□□□□ -0.8
ATG4D-202ENST00000585437 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
ATG4D-202ENST00000585437 PARP1P09874 1014 aaKnown RBP10.08□□□□□ -0.8
ATG4D-202ENST00000585437 GRM4Q14833 912 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms