RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 VCANP13611 3396 aa27.28■■□□□ 1.96
LSM7-203ENST00000585409 ORC4O43929 436 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 PGK1P00558 417 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 CLTBP09497 229 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 ZNF865P0CJ78 1059 aaPredicted RBP27.27■■□□□ 1.96
LSM7-203ENST00000585409 TSPY3P0CV98 308 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 TSPY8P0CW00 308 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 TAL1P17542 331 aaPredicted RBP27.27■■□□□ 1.96
LSM7-203ENST00000585409 STAT3P40763 770 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 HAND2P61296 217 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 AKNAD1Q5T1N1 836 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 MAFAQ8NHW3 353 aaPredicted RBP27.27■■□□□ 1.96
LSM7-203ENST00000585409 GOPCQ9HD26 462 aa27.27■■□□□ 1.96
LSM7-203ENST00000585409 KIAA0355O15063 1070 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 PRDM1O75626 825 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 REC8O95072 547 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 COPB2P35606 906 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 STAG1Q8WVM7 1258 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 MAP4K1Q92918 833 aa27.26■■□□□ 1.95
LSM7-203ENST00000585409 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.26■■□□□ 1.95
LSM7-203ENST00000585409 A0A1W2PQ45 241 aaPredicted RBP27.25■■□□□ 1.95
LSM7-203ENST00000585409 A0A1W2PQY0 241 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 TSPY2A6NKD2 308 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 ADAMTS4O75173 837 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 FAM83BQ5T0W9 1011 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.25■■□□□ 1.95
LSM7-203ENST00000585409 CNNM2Q9H8M5 875 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 LAMA4Q16363 1823 aa27.25■■□□□ 1.95
LSM7-203ENST00000585409 RANBP6O60518 1105 aaKnown RBP27.24■■□□□ 1.95
LSM7-203ENST00000585409 FGRP09769 529 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 AKR1A1P14550 325 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 EPHB4P54760 987 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 PTH1RQ03431 593 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 NEDD1Q8NHV4 660 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 MYLIPQ8WY64 445 aa27.24■■□□□ 1.95
LSM7-203ENST00000585409 TMEM265A0A087WTH1 108 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 TFAP4Q01664 338 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 TRDNQ13061 729 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 RRP12Q5JTH9 1297 aaKnown RBP27.23■■□□□ 1.95
LSM7-203ENST00000585409 RNF20Q5VTR2 975 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 MSL3Q8N5Y2 521 aaKnown RBP27.23■■□□□ 1.95
LSM7-203ENST00000585409 ESR2Q92731 530 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 KRT23Q9C075 422 aa27.23■■□□□ 1.95
LSM7-203ENST00000585409 LSG1Q9H089 658 aaKnown RBP27.23■■□□□ 1.95
LSM7-203ENST00000585409 RBM8AQ9Y5S9 174 aaKnown RBP27.23■■□□□ 1.95
LSM7-203ENST00000585409 PLIN4Q96Q06 1357 aa27.22■■□□□ 1.95
LSM7-203ENST00000585409 ANKRD33Q7Z3H0 272 aa27.22■■□□□ 1.95
LSM7-203ENST00000585409 LENG1Q96BZ8 264 aaPredicted RBP27.22■■□□□ 1.95
LSM7-203ENST00000585409 RNPC3Q96LT9 517 aaKnown RBP27.22■■□□□ 1.95
LSM7-203ENST00000585409 TSEN34Q9BSV6 310 aaKnown RBP27.22■■□□□ 1.95
LSM7-203ENST00000585409 CNPY2Q9Y2B0 182 aa27.22■■□□□ 1.95
LSM7-203ENST00000585409 MYH4Q9Y623 1939 aa27.22■■□□□ 1.95
LSM7-203ENST00000585409 TOX2Q96NM4 488 aa27.21■■□□□ 1.95
LSM7-203ENST00000585409 MCM3APO60318 1980 aa27.2■■□□□ 1.95
LSM7-203ENST00000585409 PQBP1O60828 265 aaKnown RBP27.2■■□□□ 1.94
LSM7-203ENST00000585409 RAG1P15918 1043 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 ACLYP53396 1101 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 CCDC178Q5BJE1 867 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 TBC1D10CQ8IV04 446 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 TEX13BQ9BXU2 312 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 NYAP2Q9P242 653 aa27.2■■□□□ 1.94
LSM7-203ENST00000585409 SPTBN5Q9NRC6 3674 aaKnown RBP27.2■■□□□ 1.94
LSM7-203ENST00000585409 SYNGAP1Q96PV0 1343 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 SYNRGQ9UMZ2 1314 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 DNAJC25-GNG10A0A024R161 153 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 EPB41L2O43491 1005 aaKnown RBP27.19■■□□□ 1.94
LSM7-203ENST00000585409 FPGSQ05932 587 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 FAAP100Q0VG06 881 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 CCSAPQ6IQ19 270 aaPredicted RBP27.19■■□□□ 1.94
LSM7-203ENST00000585409 MAMDC4Q6UXC1 1216 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 KLHDC9Q8NEP7 349 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 SLF1Q9BQI6 1058 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 TMEM39AQ9NV64 488 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 SYNPO2Q9UMS6 1093 aa27.19■■□□□ 1.94
LSM7-203ENST00000585409 MOXD2PA6NHM9 499 aa27.18■■□□□ 1.94
LSM7-203ENST00000585409 RAD21O60216 631 aa27.18■■□□□ 1.94
LSM7-203ENST00000585409 SNAI1O95863 264 aaPredicted RBP27.18■■□□□ 1.94
LSM7-203ENST00000585409 TTLL1O95922 423 aa27.18■■□□□ 1.94
LSM7-203ENST00000585409 RALYLQ86SE5 291 aaKnown RBP27.18■■□□□ 1.94
LSM7-203ENST00000585409 NUP88Q99567 741 aaPredicted RBP27.18■■□□□ 1.94
LSM7-203ENST00000585409 ATP2A1O14983 1001 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 CYP21A2P08686 494 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 FOSL2P15408 326 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 SNRNP48Q6IEG0 339 aaKnown RBP27.17■■□□□ 1.94
LSM7-203ENST00000585409 ZNF467Q7Z7K2 595 aaPredicted RBP27.17■■□□□ 1.94
LSM7-203ENST00000585409 IQCA1Q86XH1 822 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 NUP133Q8WUM0 1156 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 STARD7Q9NQZ5 370 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 FAM184BQ9ULE4 1060 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 RIPK3Q9Y572 518 aa27.17■■□□□ 1.94
LSM7-203ENST00000585409 IGKV6D-41A0A0C4DH26 115 aa27.16■■□□□ 1.94
LSM7-203ENST00000585409 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.16■■□□□ 1.94
LSM7-203ENST00000585409 PRPF38AQ8NAV1 312 aaKnown RBP27.16■■□□□ 1.94
LSM7-203ENST00000585409 TCP11L1Q9NUJ3 509 aa27.16■■□□□ 1.94
LSM7-203ENST00000585409 MTMR4Q9NYA4 1195 aa27.16■■□□□ 1.94
LSM7-203ENST00000585409 DCDC2CA8MYV0 355 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 F5H6K3 240 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 NDUFB10O96000 172 aa27.15■■□□□ 1.94
LSM7-203ENST00000585409 CST5P28325 142 aaPredicted RBP27.15■■□□□ 1.94
LSM7-203ENST00000585409 KLRC3Q07444 240 aa27.15■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms