RNA–Protein interactions for RNA: ENST00000585265.1

PSMD11-211, Transcript of proteasome 26S subunit, non-ATPase 11, human

TSL 2

Gene PSMD11, Length 670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD11-211	ENST00000585265	RCSD1	Q6JBY9	416 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	POTEE	Q6S8J3	1075 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	FERMT3	Q86UX7	667 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	TRIM22	Q8IYM9	498 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	CTCFL	Q8NI51	663 aa	Predicted RBP	13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	PXYLP1	Q8TE99	480 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	PHKB	Q93100	1093 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	SHISA4	Q96DD7	197 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	CHAMP1	Q96JM3	812 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	C8orf76	Q96K31	380 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	SLC26A6	Q9BXS9	759 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	KIAA1683	Q9H0B3	1180 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	RNF208	Q9H0X6	261 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	UNC93B1	Q9H1C4	597 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	IL17RB	Q9NRM6	502 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	RBM28	Q9NW13	759 aa	Known RBP	13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	GJD2	Q9UKL4	321 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	STX8	Q9UNK0	236 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	PLIN4	Q96Q06	1357 aa		13.92	□□□□□ -0.18
PSMD11-211	ENST00000585265	STK36	Q9NRP7	1315 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	INHA	P05111	366 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	IFNAR1	P17181	557 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	NCL	P19338	710 aa	Known RBP	13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP14	P54578	494 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	GUCY1B3	Q02153	619 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	PPP2R5B	Q15173	497 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	PNMA1	Q8ND90	353 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	GPRC5A	Q8NFJ5	357 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	ANKS1A	Q92625	1134 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	ALG1	Q9BT22	464 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265	PAGR1	Q9BTK6	254 aa		13.91	□□□□□ -0.18
PSMD11-211	ENST00000585265		A0A1W2PRG0	241 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L15	C9J2P7	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L13	C9JLJ4	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L11	C9JVI0	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L18	D6R9N7	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L22	D6RA61	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L17	D6RBQ6	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L19	D6RCP7	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L20	D6RJB6	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	GJB1	P08034	283 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	VCAM1	P19320	739 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	GJA8	P48165	433 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	ERVK-9	P63128	1117 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	ERVK-24	P63145	666 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	USP17L24	Q0WX57	530 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	NTRK3	Q16288	839 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	CATSPERG	Q6ZRH7	1159 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	WASF1	Q92558	559 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	MTMR7	Q9Y216	660 aa		13.9	□□□□□ -0.18
PSMD11-211	ENST00000585265	CNMD	O75829	334 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	PLEKHA8P1	O95397	391 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	TOP1	P11387	765 aa	Known RBP	13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	KIF5B	P33176	963 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	AKAP17A	Q02040	695 aa	Known RBP	13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	TROAP	Q12815	778 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	REST	Q13127	1097 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	TRIM29	Q14134	588 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	TMTC3	Q6ZXV5	915 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	CMTR1	Q8N1G2	835 aa	Known RBP	13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	CCDC82	Q8N4S0	544 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	CEP95	Q96GE4	821 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	CCDC17	Q96LX7	622 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	TMEM47	Q9BQJ4	181 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	PORCN	Q9H237	461 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	RLF	Q13129	1914 aa		13.89	□□□□□ -0.19
PSMD11-211	ENST00000585265	CYP2B6	P20813	491 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	GRM4	Q14833	912 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	TMEM179	Q6ZVK1	233 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	CLEC10A	Q8IUN9	316 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	SIAH1	Q8IUQ4	282 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	U2AF1L4	Q8WU68	220 aa	Known RBP	13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	AIFM3	Q96NN9	605 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	RPAP3	Q9H6T3	665 aa	Predicted RBP	13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	CNPY2	Q9Y2B0	182 aa		13.88	□□□□□ -0.19
PSMD11-211	ENST00000585265	PARP14	Q460N5	1801 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	IGKV6D-41	A0A0C4DH26	115 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	FIBP	O43427	364 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	DEXI	O95424	95 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	SGPL1	O95470	568 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	GNAQ	P50148	359 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	DNM1	Q05193	864 aa	Known RBP	13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	TRIM32	Q13049	653 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	KIAA1755	Q5JYT7	1200 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	PPP4R3B	Q5MIZ7	849 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	GPR142	Q7Z601	462 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	RNF26	Q9BY78	433 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	MTMR4	Q9NYA4	1195 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	RABGAP1	Q9Y3P9	1069 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	MYH6	P13533	1939 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	CNTNAP5	Q8WYK1	1306 aa		13.87	□□□□□ -0.19
PSMD11-211	ENST00000585265	GREB1L	Q9C091	1923 aa	Predicted RBP	13.86	□□□□□ -0.19
PSMD11-211	ENST00000585265	SPDYE16	A6NNV3	312 aa	Predicted RBP	13.86	□□□□□ -0.19
PSMD11-211	ENST00000585265	TRAK2	O60296	914 aa		13.86	□□□□□ -0.19
PSMD11-211	ENST00000585265	PRPF40A	O75400	957 aa	Known RBP	13.86	□□□□□ -0.19
PSMD11-211	ENST00000585265	HMGCR	P04035	888 aa		13.86	□□□□□ -0.19
PSMD11-211	ENST00000585265	MAPK4	P31152	587 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 20 ms