RNA–Protein interactions for RNA: ENST00000585134.1

MKS1-213, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-213ENST00000585134 RUFY3Q7L099 469 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 SGMS1Q86VZ5 419 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 ADGRF4Q8IZF3 695 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 SOCS4Q8WXH5 440 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 PIBF1Q8WXW3 757 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 MMP19Q99542 508 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 NUDT12Q9BQG2 462 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 RIPK3Q9Y572 518 aa16.48■□□□□ 0.23
MKS1-213ENST00000585134 ZNF536O15090 1300 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 DOCK3Q8IZD9 2030 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 PALM3A6NDB9 673 aaPredicted RBP16.47■□□□□ 0.23
MKS1-213ENST00000585134 GOLGA8AA7E2F4 631 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 PLEKHA8P1O95397 391 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 PTPREP23469 700 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 KIF5BP33176 963 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 OAZ1P54368 228 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 ANAPC15P60006 121 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 USH1GQ495M9 461 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 HOMER1Q86YM7 354 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 SH3TC2Q8TF17 1288 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 TM6SF1Q9BZW5 370 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 MROH8Q9H579 483 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 PDRG1Q9NUG6 133 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 HPS5Q9UPZ3 1129 aa16.47■□□□□ 0.23
MKS1-213ENST00000585134 ZBTB43O43298 467 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 CALM1P0DP23 149 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 CALM2P0DP24 149 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 CALM3P0DP25 149 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 ELNP15502 786 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 ADORA2AP29274 412 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 RGS2P41220 211 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 SLC35G1Q2M3R5 365 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
MKS1-213ENST00000585134 UPF2Q9HAU5 1272 aaKnown RBP16.46■□□□□ 0.23
MKS1-213ENST00000585134 ZNF236Q9UL36 1845 aa16.46■□□□□ 0.23
MKS1-213ENST00000585134 SLC15A5A6NIM6 579 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 MYCP01106 439 aaPredicted RBP16.45■□□□□ 0.22
MKS1-213ENST00000585134 ICAM1P05362 532 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 FCER1AP12319 257 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 MAP2K5Q13163 448 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 GRB14Q14449 540 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 KCTD2Q14681 263 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 RTN1Q16799 776 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 QRICH1Q2TAL8 776 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 SLC9C1Q4G0N8 1177 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 MORN1Q5T089 497 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 CMTR1Q8N1G2 835 aaKnown RBP16.45■□□□□ 0.22
MKS1-213ENST00000585134 TRERF1Q96PN7 1200 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 APBA2Q99767 749 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 JMJD4Q9H9V9 463 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 BIN2Q9UBW5 565 aaPredicted RBP16.45■□□□□ 0.22
MKS1-213ENST00000585134 GJD2Q9UKL4 321 aa16.45■□□□□ 0.22
MKS1-213ENST00000585134 ADCY3O60266 1144 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 GRK4P32298 578 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 TOB2Q14106 344 aaPredicted RBP16.44■□□□□ 0.22
MKS1-213ENST00000585134 MUM1L1Q5H9M0 696 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 NOL8Q76FK4 1167 aaKnown RBP16.44■□□□□ 0.22
MKS1-213ENST00000585134 PIGSQ96S52 555 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 MAP3K14Q99558 947 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 ACAD9Q9H845 621 aa16.44■□□□□ 0.22
MKS1-213ENST00000585134 MYH6P13533 1939 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 CYTH3O43739 400 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 PGK2P07205 417 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 GNAQP50148 359 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 METAP2P50579 478 aaKnown RBP eCLIP16.43■□□□□ 0.22
MKS1-213ENST00000585134 IRF5Q13568 498 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 CCL14Q16627 93 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 TKFCQ3LXA3 575 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 NSMFQ6X4W1 530 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 TMTC3Q6ZXV5 915 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 DPP9Q86TI2 863 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 FBXO11Q86XK2 927 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 ANKRD35Q8N283 1001 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 SRBD1Q8N5C6 995 aaKnown RBP16.43■□□□□ 0.22
MKS1-213ENST00000585134 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 SLAIN1Q8ND83 568 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 CHST13Q8NET6 341 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 NPLOC4Q8TAT6 608 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 ABHD8Q96I13 439 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 FBXO40Q9UH90 709 aa16.43■□□□□ 0.22
MKS1-213ENST00000585134 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
MKS1-213ENST00000585134 COBLO75128 1261 aa16.42■□□□□ 0.22
MKS1-213ENST00000585134 TRIB2Q92519 343 aa16.42■□□□□ 0.22
MKS1-213ENST00000585134 USP6NLQ92738 828 aa16.42■□□□□ 0.22
MKS1-213ENST00000585134 RBM28Q9NW13 759 aaKnown RBP16.42■□□□□ 0.22
MKS1-213ENST00000585134 BAZ2BQ9UIF8 2168 aaKnown RBP16.41■□□□□ 0.22
MKS1-213ENST00000585134 RBBP6Q7Z6E9 1792 aaKnown RBP16.41■□□□□ 0.22
MKS1-213ENST00000585134 NFIBO00712 420 aa16.41■□□□□ 0.22
MKS1-213ENST00000585134 ZBTB5O15062 677 aa16.41■□□□□ 0.22
MKS1-213ENST00000585134 STRNO43815 780 aa16.41■□□□□ 0.22
MKS1-213ENST00000585134 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms