RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 SNHG28P0DPA3 235 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TRIM29Q14134 588 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 TPD52L1Q16890 204 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 SLC35G1Q2M3R5 365 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 LZTS2Q9BRK4 669 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 CPVLQ9H3G5 476 aa17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.08■□□□□ 0.33
CDK5RAP3-236ENST00000584991 PITPNM2Q9BZ72 1349 aa17.08■□□□□ 0.32
CDK5RAP3-236ENST00000584991 U2AF2P26368 475 aaKnown RBP eCLIP17.07■□□□□ 0.326e-7■■■□□ 18.2
CDK5RAP3-236ENST00000584991 CCDC150Q8NCX0 1101 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PPP2R3BQ9Y5P8 575 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CYTH3O43739 400 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SKILP12757 684 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 EPHX2P34913 555 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ASPRV1Q53RT3 343 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DCAF15Q66K64 600 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SMAP1Q8IYB5 467 aaPredicted RBP17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 AOPEPQ8N6M6 819 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DCPSQ96C86 337 aaKnown RBP17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GPCPD1Q9NPB8 672 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 TUBE1Q9UJT0 475 aa17.07■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SCN4AP35499 1836 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 A0A1W2PRG0 241 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ZNF543Q08ER8 600 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SLFN13Q68D06 897 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 NYAP1Q6ZVC0 841 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 USP50Q70EL3 339 aaPredicted RBP17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCDC112Q8NEF3 446 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 HOOK2Q96ED9 719 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 UBA5Q9GZZ9 404 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 HPSEQ9Y251 543 aa17.06■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ASNSP08243 561 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCDC96Q2M329 555 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 KCTD1Q719H9 257 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SPZ1Q9BXG8 430 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ZNF341Q9BYN7 854 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ARHGEF10LQ9HCE6 1279 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 VPS54Q9P1Q0 977 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 KCNJ14Q9UNX9 436 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 F5H6K3 240 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CUTAO60888 179 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SCG2P13521 617 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 VEGFAP15692 232 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ECE1P42892 770 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCZ1BP86790 482 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCZ1P86791 482 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 KLRC3Q07444 240 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PTPN14Q15678 1187 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CEP135Q66GS9 1140 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DLK2Q6UY11 383 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCDC84Q86UT8 332 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ACER1Q8TDN7 264 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SHISA4Q96DD7 197 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 C16orf45Q96MC5 204 aaPredicted RBP17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 FEZ1Q99689 392 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
CDK5RAP3-236ENST00000584991 KIF28PB7ZC32 967 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ADM5C9JUS6 153 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCP110O43303 1012 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 MMP1P03956 469 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PFKFB1P16118 471 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 XBP1P17861 261 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SMARCA1P28370 1054 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SLC1A4P43007 532 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SYKP43405 635 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GPATCH4Q5T3I0 446 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SULF1Q8IWU6 871 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GMCL1P1Q8NEA9 526 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 HOOK1Q9UJC3 728 aaKnown RBP17.04■□□□□ 0.32
CDK5RAP3-236ENST00000584991 POTECB2RU33 542 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CTNND1O60716 968 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 NDUFB10O96000 172 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 INPP5BP32019 993 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 PTPAQ15257 358 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 TAF1DQ9H5J8 278 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 RIOX1Q9H6W3 641 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 TMX2Q9Y320 296 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 MORC2Q9Y6X9 1032 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 IQCA1LA6NCM1 817 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CBFA2T2O43439 604 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DPCR1Q3MIW9 517 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 EAPPQ56P03 285 aaPredicted RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 HOMER1Q86YM7 354 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 CCAR2Q8N163 923 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 RRP36Q96EU6 259 aaKnown RBP17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 ZNF112Q9UJU3 913 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SYNPO2Q9UMS6 1093 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 DOCK1Q14185 1865 aa17.03■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SLC16A2P36021 539 aa17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 GNL2Q13823 731 aaKnown RBP17.02■□□□□ 0.32
CDK5RAP3-236ENST00000584991 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms