RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 TSPY3P0CV98 308 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 TSPY8P0CW00 308 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 BMP3P12645 472 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 FOSL2P15408 326 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCDC57-219ENST00000584717 ARMCX2Q7L311 632 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 CHST13Q8NET6 341 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 GLT1D1Q96MS3 346 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 ABHD16BQ9H3Z7 469 aa19.74■□□□□ 0.75
CCDC57-219ENST00000584717 PLIN4Q96Q06 1357 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 TMEM232C9JQI7 657 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 ASGR1P07306 291 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 CST5P28325 142 aaPredicted RBP19.73■□□□□ 0.75
CCDC57-219ENST00000584717 OAZ1P54368 228 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 CNTN2Q02246 1040 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 CCDC144CPQ8IYA2 1237 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 NEDD1Q8NHV4 660 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 VTI1AQ96AJ9 217 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 NACAP1Q9BZK3 213 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 SPC25Q9HBM1 224 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 TBX21Q9UL17 535 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 SYNPO2Q9UMS6 1093 aa19.73■□□□□ 0.75
CCDC57-219ENST00000584717 TIMP1P01033 207 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 GJA9P57773 515 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 TFAP4Q01664 338 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 PDE4BQ07343 736 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 IKQ13123 557 aaPredicted RBP19.72■□□□□ 0.75
CCDC57-219ENST00000584717 LRRFIP1Q32MZ4 808 aaKnown RBP19.72■□□□□ 0.75
CCDC57-219ENST00000584717 PCSK9Q8NBP7 692 aaKnown RBP19.72■□□□□ 0.75
CCDC57-219ENST00000584717 FSD1Q9BTV5 496 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 NAPBQ9H115 298 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 UPF3AQ9H1J1 476 aaKnown RBP19.72■□□□□ 0.75
CCDC57-219ENST00000584717 ELP1O95163 1332 aa19.72■□□□□ 0.75
CCDC57-219ENST00000584717 TMEM265A0A087WTH1 108 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 DNAJB2P25686 324 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 STAT2P52630 851 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 PPARAQ07869 468 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 GNASQ5JWF2 1037 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 PI4K2BQ8TCG2 481 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 OTUD7AQ8TE49 926 aaPredicted RBP19.71■□□□□ 0.75
CCDC57-219ENST00000584717 AGBL1Q96MI9 1066 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCDC57-219ENST00000584717 KATNBL1Q9H079 304 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 RNF146Q9NTX7 359 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 MROH7Q68CQ1 1323 aa19.71■□□□□ 0.75
CCDC57-219ENST00000584717 A0A0U1RQG5 324 aaPredicted RBP19.7■□□□□ 0.74
CCDC57-219ENST00000584717 SLC3A2P08195 630 aaKnown RBP19.7■□□□□ 0.74
CCDC57-219ENST00000584717 CDK7P50613 346 aa19.7■□□□□ 0.74
CCDC57-219ENST00000584717 BEX3Q00994 111 aa19.7■□□□□ 0.74
CCDC57-219ENST00000584717 MFSD5Q6N075 450 aa19.7■□□□□ 0.74
CCDC57-219ENST00000584717 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
CCDC57-219ENST00000584717 A1CFQ9NQ94 594 aaKnown RBP19.7■□□□□ 0.74
CCDC57-219ENST00000584717 TTC41PQ6P2S7 1318 aa19.7■□□□□ 0.74
CCDC57-219ENST00000584717 LRRC37A2A6NM11 1700 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.69■□□□□ 0.74
CCDC57-219ENST00000584717 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.69■□□□□ 0.74
CCDC57-219ENST00000584717 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.69■□□□□ 0.74
CCDC57-219ENST00000584717 ARVCFO00192 962 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 ERC2O15083 957 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 CTAGE5O15320 804 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 FDX1P10109 184 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 MCCP23508 829 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 SLC1A4P43007 532 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 SNAP25P60880 206 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 GRIN2CQ14957 1233 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 ZMYM1Q5SVZ6 1142 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 KCTD1Q719H9 257 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 RASGRP2Q7LDG7 609 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 FAM160B2Q86V87 743 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 GMCL1Q96IK5 515 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 DDX49Q9Y6V7 483 aaKnown RBP19.69■□□□□ 0.74
CCDC57-219ENST00000584717 ZNF536O15090 1300 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 CHD9Q3L8U1 2897 aa19.69■□□□□ 0.74
CCDC57-219ENST00000584717 SOWAHBA6NEL2 793 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 ALAS1P13196 640 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 CSF2RAP15509 400 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 PPIGQ13427 754 aaKnown RBP eCLIP19.68■□□□□ 0.74
CCDC57-219ENST00000584717 CCDC174Q6PII3 467 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 CCDC129Q6ZRS4 1044 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
CCDC57-219ENST00000584717 C16orf59Q7L2K0 433 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 FAM126BQ8IXS8 530 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 CHURC1Q8WUH1 139 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 STAG1Q8WVM7 1258 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 INCENPQ9NQS7 918 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 STX8Q9UNK0 236 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 ASTN1O14525 1302 aa19.68■□□□□ 0.74
CCDC57-219ENST00000584717 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
CCDC57-219ENST00000584717 PTGS1P23219 599 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 TNFAIP2Q03169 654 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 CTDSPL2Q05D32 466 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 TMEM240Q5SV17 173 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 TIFAQ96CG3 184 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 TRERF1Q96PN7 1200 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 MTMR7Q9Y216 660 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.67■□□□□ 0.74
CCDC57-219ENST00000584717 PCDHB15Q9Y5E8 787 aa19.67■□□□□ 0.74
CCDC57-219ENST00000584717 TTC28Q96AY4 2481 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms