RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ATP11BQ9Y2G3 1177 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 TACC3Q9Y6A5 838 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 DDX60LQ5H9U9 1706 aaKnown RBP6.49□□□□□ -1.37
VAPA-207ENST00000583879 DOCK3Q8IZD9 2030 aa6.49□□□□□ -1.37
VAPA-207ENST00000583879 PTPRFP10586 1907 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 UNC80Q8N2C7 3258 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 A0A1W2PRG0 241 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 TRIM43BA6NCK2 446 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 KBTBD13C9JR72 458 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 COBLO75128 1261 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ZMYND10O75800 440 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 IDH1O75874 414 aaKnown RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 TRIM27P14373 513 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ERCC3P19447 782 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ADORA2AP29274 412 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 SHMT1P34896 483 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ADCYAP1R1P41586 468 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 OS9Q13438 667 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 SNX17Q15036 470 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 LRRC41Q15345 812 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 TRIM60Q495X7 471 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 PRAMEF19Q5SWL8 479 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ANO1Q5XXA6 986 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 TMED8Q6PL24 325 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 SH3RF1Q7Z6J0 888 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 MAGEB6Q8N7X4 407 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 SHCBP1Q8NEM2 672 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 SSH3Q8TE77 659 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 MYLIPQ8WY64 445 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 SYMPKQ92797 1274 aaKnown RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 TRIM43Q96BQ3 446 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 MOV10L1Q9BXT6 1211 aaKnown RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 SPATC1LQ9H0A9 340 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 CCDC8Q9H0W5 538 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 TTYH1Q9H313 450 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 MROH8Q9H579 483 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 PRDM6Q9NQX0 595 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 SLC5A4Q9NY91 659 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 DBNLQ9UJU6 430 aaKnown RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 NOP58Q9Y2X3 529 aaKnown RBP6.48□□□□□ -1.37
VAPA-207ENST00000583879 LOC285556D6RIA3 1793 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 ALPK3Q96L96 1907 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 PLXNB2O15031 1838 aa6.48□□□□□ -1.37
VAPA-207ENST00000583879 MYH13Q9UKX3 1938 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 KDM4AO75164 1064 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 BCAR3O75815 825 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 POLR3DP05423 398 aaPredicted RBP6.47□□□□□ -1.37
VAPA-207ENST00000583879 SKOR1P84550 965 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 TLE2Q04725 743 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 GABPAQ06546 454 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 MAP3K12Q12852 859 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 SEPT2Q15019 361 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 ABRAQ8N0Z2 381 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 MB21D1Q8N884 522 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 ZSCAN1Q8NBB4 408 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 FRAT1Q92837 279 aaPredicted RBP6.47□□□□□ -1.37
VAPA-207ENST00000583879 IRF7Q92985 503 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 FERMT2Q96AC1 680 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 CLUAP1Q96AJ1 413 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 EAF2Q96CJ1 260 aaPredicted RBP6.47□□□□□ -1.37
VAPA-207ENST00000583879 ANTXR1Q9H6X2 564 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 PDLIM7Q9NR12 457 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 TNNQ9UQP3 1299 aa6.47□□□□□ -1.37
VAPA-207ENST00000583879 TMEM265A0A087WTH1 108 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.46□□□□□ -1.38
VAPA-207ENST00000583879 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.46□□□□□ -1.38
VAPA-207ENST00000583879 FCER1AP12319 257 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 FOSL2P15408 326 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 CD46P15529 392 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 ITGB8P26012 769 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 GMPRP36959 345 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 EPHB4P54760 987 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 PLS1Q14651 629 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 FAM47AQ5JRC9 791 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 NCAPG2Q86XI2 1143 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 SIAH1Q8IUQ4 282 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 NPAS3Q8IXF0 933 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 TMEM57Q8N5G2 664 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 MAML3Q96JK9 1138 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 RIOK1Q9BRS2 568 aaKnown RBP6.46□□□□□ -1.38
VAPA-207ENST00000583879 TANGO6Q9C0B7 1094 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 TLR7Q9NYK1 1049 aaKnown RBP6.46□□□□□ -1.38
VAPA-207ENST00000583879 NRBP1Q9UHY1 535 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 PHF24Q9UPV7 400 aa6.46□□□□□ -1.38
VAPA-207ENST00000583879 MAGEB6P1A0A0J9YX57 407 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 MPHOSPH10O00566 681 aaKnown RBP6.45□□□□□ -1.38
VAPA-207ENST00000583879 KIAA0355O15063 1070 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 FLOT1O75955 427 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 SLC25A27O95847 323 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 PGK1P00558 417 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 CLTBP09497 229 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 RARBP10826 455 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 RAG1P15918 1043 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 USP46P62068 366 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 GRIN2CQ14957 1233 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 TMEM132BQ14DG7 1078 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 TTF1Q15361 905 aaPredicted RBP6.45□□□□□ -1.38
VAPA-207ENST00000583879 KIAA1755Q5JYT7 1200 aa6.45□□□□□ -1.38
VAPA-207ENST00000583879 SLC9C2Q5TAH2 1124 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms