RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 APPBP2Q92624 585 aa24.38■■□□□ 1.49
SRSF1-206ENST00000583741 ZBED4O75132 1171 aa24.37■■□□□ 1.49
SRSF1-206ENST00000583741 C6orf222P0C671 652 aaPredicted RBP24.37■■□□□ 1.49
SRSF1-206ENST00000583741 NUCB1Q02818 461 aa24.37■■□□□ 1.49
SRSF1-206ENST00000583741 ANKRD45Q5TZF3 282 aa24.37■■□□□ 1.49
SRSF1-206ENST00000583741 CEP95Q96GE4 821 aa24.37■■□□□ 1.49
SRSF1-206ENST00000583741 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.37■■□□□ 1.492e-21■■□□□ 11.4
SRSF1-206ENST00000583741 GPAA1O43292 621 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 ASGR1P07306 291 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 CCDC144BQ3MJ40 725 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 LRRC47Q8N1G4 583 aaKnown RBP24.36■■□□□ 1.49
SRSF1-206ENST00000583741 ANKRD35Q8N283 1001 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 MKL1Q969V6 931 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 GLT1D1Q96MS3 346 aa24.36■■□□□ 1.49
SRSF1-206ENST00000583741 UPF3AQ9H1J1 476 aaKnown RBP24.36■■□□□ 1.49
SRSF1-206ENST00000583741 ELP1O95163 1332 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.35■■□□□ 1.49
SRSF1-206ENST00000583741 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.35■■□□□ 1.49
SRSF1-206ENST00000583741 CDK7P50613 346 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 C16orf59Q7L2K0 433 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 ARMCX2Q7L311 632 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 ABHD16BQ9H3Z7 469 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 MTMR4Q9NYA4 1195 aa24.35■■□□□ 1.49
SRSF1-206ENST00000583741 ZBTB47Q9UFB7 747 aaPredicted RBP24.35■■□□□ 1.49
SRSF1-206ENST00000583741 CTDP1Q9Y5B0 961 aaPredicted RBP24.35■■□□□ 1.49
SRSF1-206ENST00000583741 M0R2C6 588 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 RNF113AO15541 343 aaKnown RBP24.34■■□□□ 1.49
SRSF1-206ENST00000583741 TDO2P48775 406 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 MFSD5Q6N075 450 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 CHD1LQ86WJ1 897 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 USP38Q8NB14 1042 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 KATNBL1Q9H079 304 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 FEM1BQ9UK73 627 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 CHD7Q9P2D1 2997 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 MROH7Q68CQ1 1323 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 LRRC37A2A6NM11 1700 aa24.34■■□□□ 1.49
SRSF1-206ENST00000583741 CTAGE5O15320 804 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 GJA9P57773 515 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 CCDC144CPQ8IYA2 1237 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 PCSK9Q8NBP7 692 aaKnown RBP24.33■■□□□ 1.49
SRSF1-206ENST00000583741 GMCL1P1Q8NEA9 526 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 CHST13Q8NET6 341 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 HOMER2Q9NSB8 354 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 FBXO40Q9UH90 709 aa24.33■■□□□ 1.49
SRSF1-206ENST00000583741 PLIN4Q96Q06 1357 aa24.33■■□□□ 1.48
SRSF1-206ENST00000583741 OAZ1P54368 228 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 SKAP1Q86WV1 359 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 ZNF444Q8N0Y2 327 aaPredicted RBP24.32■■□□□ 1.48
SRSF1-206ENST00000583741 LNPKQ9C0E8 428 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 ZNF576Q9H609 170 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 MYO9BQ13459 2157 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 TTLL1O95922 423 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 CNTN2Q02246 1040 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 GNASQ5JWF2 1037 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 TMEM240Q5SV17 173 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 FAM126BQ8IXS8 530 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 VTI1AQ96AJ9 217 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 TIFAQ96CG3 184 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 SYNPO2Q9UMS6 1093 aa24.32■■□□□ 1.48
SRSF1-206ENST00000583741 A0A0U1RQG5 324 aaPredicted RBP24.31■■□□□ 1.48
SRSF1-206ENST00000583741 ARVCFO00192 962 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 APPP05067 770 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 CSF2RAP15509 400 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 GNAT2P19087 354 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 PBX2P40425 430 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 PPIGQ13427 754 aaKnown RBP eCLIP24.31■■□□□ 1.485e-26■■□□□ 13.2
SRSF1-206ENST00000583741 RASIP1Q5U651 963 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 SLFN13Q68D06 897 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 SPC25Q9HBM1 224 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 ZNF287Q9HBT7 754 aa24.31■■□□□ 1.48
SRSF1-206ENST00000583741 GRXCR1A8MXD5 290 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 ZFYP08048 801 aaPredicted RBP24.3■■□□□ 1.48
SRSF1-206ENST00000583741 BMP3P12645 472 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 IFNL3Q8IZI9 196 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 FAM133AQ8N9E0 248 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 PBX4Q9BYU1 374 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 PPP1R12CQ9BZL4 782 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 ASTN1O14525 1302 aa24.3■■□□□ 1.48
SRSF1-206ENST00000583741 GBF1Q92538 1859 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 LCTP09848 1927 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.29■■□□□ 1.48
SRSF1-206ENST00000583741 ACRP10323 421 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 BEX3Q00994 111 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 NEDD1Q8NHV4 660 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 CHMP4CQ96CF2 233 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 GPATCH3Q96I76 525 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 SEC62Q99442 399 aaKnown RBP24.29■■□□□ 1.48
SRSF1-206ENST00000583741 ZNF536O15090 1300 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 REV3LO60673 3130 aa24.29■■□□□ 1.48
SRSF1-206ENST00000583741 PATL2C9JE40 543 aaKnown RBP24.28■■□□□ 1.48
SRSF1-206ENST00000583741 TMEM232C9JQI7 657 aa24.28■■□□□ 1.48
SRSF1-206ENST00000583741 AGBL1Q96MI9 1066 aa24.28■■□□□ 1.48
SRSF1-206ENST00000583741 ACAD9Q9H845 621 aa24.28■■□□□ 1.48
SRSF1-206ENST00000583741 A1CFQ9NQ94 594 aaKnown RBP24.28■■□□□ 1.48
SRSF1-206ENST00000583741 DDX49Q9Y6V7 483 aaKnown RBP24.28■■□□□ 1.48
SRSF1-206ENST00000583741 SOWAHBA6NEL2 793 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 TSPY3P0CV98 308 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 TSPY8P0CW00 308 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 PTGS1P23219 599 aa24.27■■□□□ 1.48
SRSF1-206ENST00000583741 NKX3-2P78367 333 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms