RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 CRBNQ96SW2 442 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ABHD16BQ9H3Z7 469 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 RNF146Q9NTX7 359 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 MTMR10Q9NXD2 777 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 MTMR7Q9Y216 660 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 MCM3APO60318 1980 aa10.31□□□□□ -0.76
CDK5RAP3-229ENST00000583697 POTEB2H3BUK9 544 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 RANBP6O60518 1105 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 DUSP11O75319 330 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 SNAI1O95863 264 aaPredicted RBP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 NEFLP07196 543 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ALAS1P13196 640 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CTDSPL2Q05D32 466 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 SHHQ15465 462 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CCDC174Q6PII3 467 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 KCTD1Q719H9 257 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ARMCX2Q7L311 632 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 SH3RF1Q7Z6J0 888 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 PCSK9Q8NBP7 692 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CHMP4CQ96CF2 233 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FAM161BQ96MY7 647 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 A1CFQ9NQ94 594 aaKnown RBP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 HELLSQ9NRZ9 838 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TMEM39AQ9NV64 488 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 COL6A3P12111 3177 aa10.3□□□□□ -0.76
CDK5RAP3-229ENST00000583697 LCTP09848 1927 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TRIM43BA6NCK2 446 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 DCDC2CA8MYV0 355 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TRIM6-TRIM34B2RNG4 842 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 MCCP23508 829 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CST5P28325 142 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FPGSQ05932 587 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TKFCQ3LXA3 575 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CCDC144BQ3MJ40 725 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 RRP12Q5JTH9 1297 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 C9orf50Q5SZB4 431 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 VPS53Q5VIR6 699 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FAM109BQ6ICB4 259 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CCDC144CPQ8IYA2 1237 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 STAG1Q8WVM7 1258 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TRIM43Q96BQ3 446 aaPredicted RBP10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 RNPC3Q96LT9 517 aaKnown RBP10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TRERF1Q96PN7 1200 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ANAPC4Q9UJX5 808 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CCPG1Q9ULG6 757 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ZMYM6O95789 1325 aa10.29□□□□□ -0.76
CDK5RAP3-229ENST00000583697 SMCHD1A6NHR9 2005 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 MYADML2A6NDP7 307 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ASB14A6NK59 587 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 KIAA0355O15063 1070 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FOXP2O15409 715 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 TLR3O15455 904 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 NMT2O60551 498 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ASGR1P07306 291 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 PDE1AP54750 535 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 GJA9P57773 515 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 HDAC1Q13547 482 aaPredicted RBP10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 KCNA10Q16322 511 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 NOL8Q76FK4 1167 aaKnown RBP10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 RASGRP2Q7LDG7 609 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ANKRD33Q7Z3H0 272 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FAM133AQ8N9E0 248 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 KLHDC9Q8NEP7 349 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 DCAF4Q8WV16 495 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 VTI1AQ96AJ9 217 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 FGD4Q96M96 766 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 AGBL1Q96MI9 1066 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 PRR12Q9ULL5 1215 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ZNF536O15090 1300 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 ELP1O95163 1332 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 CCDC171Q6TFL3 1326 aa10.28□□□□□ -0.76
CDK5RAP3-229ENST00000583697 A0A0D9SFI3 127 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 A0A0U1RQG5 324 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 DLL1O00548 723 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ADCY6O43306 1168 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ORC4O43929 436 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PLA2G6O60733 806 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MFAP1P55081 439 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 SMAD3P84022 425 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 CNTN2Q02246 1040 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FAAP100Q0VG06 881 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 MCMDC2Q4G0Z9 681 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GNASQ5JWF2 1037 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RCSD1Q6JBY9 416 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 NSMFQ6X4W1 530 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TLK2Q86UE8 772 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 RILPL2Q969X0 211 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FAM227BQ96M60 508 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TOX2Q96NM4 488 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 GUCD1Q96NT3 240 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 LNPKQ9C0E8 428 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 UPF3AQ9H1J1 476 aaKnown RBP10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 IL17RBQ9NRM6 502 aa10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 FRMPD2Q68DX3 1309 aaPredicted RBP10.27□□□□□ -0.77
CDK5RAP3-229ENST00000583697 ICAM1P05362 532 aa10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 TOP1P11387 765 aaKnown RBP10.26□□□□□ -0.77
CDK5RAP3-229ENST00000583697 PCP11498 1178 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms