RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 FOXK2Q01167 660 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 TAP1Q03518 808 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 GRB10Q13322 594 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 DEFB128Q7Z7B8 93 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 TLK2Q86UE8 772 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 CHST13Q8NET6 341 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 UPF3BQ9BZI7 483 aaKnown RBP13.4□□□□□ -0.26
CASC3-208ENST00000583649 FTOQ9C0B1 505 aaKnown RBP eCLIP13.4□□□□□ -0.26
CASC3-208ENST00000583649 TRPV6Q9H1D0 765 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 ZNFX1Q9P2E3 1918 aaKnown RBP13.4□□□□□ -0.26
CASC3-208ENST00000583649 MUC6Q6W4X9 2439 aa13.4□□□□□ -0.26
CASC3-208ENST00000583649 UMODL1Q5DID0 1318 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 ATP2A1O14983 1001 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 DCXO43602 365 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 BAIAP3O94812 1187 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 EEF2P13639 858 aaKnown RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 BEX3Q00994 111 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 LEXMQ3ZCV2 418 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 BRDTQ58F21 947 aaPredicted RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 FAM83BQ5T0W9 1011 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 HERC6Q8IVU3 1022 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 FAM178BQ8IXR5 827 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 CCDC144CPQ8IYA2 1237 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 CPXCR1Q8N123 301 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 KHSRPQ92945 711 aaKnown RBP eCLIP13.39□□□□□ -0.27
CASC3-208ENST00000583649 SCLYQ96I15 445 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 WNT8AQ9H1J5 351 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 UBE2ZQ9H832 354 aaPredicted RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 GPHNQ9NQX3 736 aaPredicted RBP13.39□□□□□ -0.27
CASC3-208ENST00000583649 Q9Y3F1 56 aa13.39□□□□□ -0.27
CASC3-208ENST00000583649 ST18O60284 1047 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 AKR1B1P15121 316 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 SLFN5Q08AF3 891 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 TTLL4Q14679 1199 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 SLC9C2Q5TAH2 1124 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 FBXL18Q96ME1 805 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 CRBNQ96SW2 442 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 PRRX2Q99811 253 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 DCP1AQ9NPI6 582 aaPredicted RBP13.38□□□□□ -0.27
CASC3-208ENST00000583649 ATP8A2Q9NTI2 1148 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 CTNNA3Q9UI47 895 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
CASC3-208ENST00000583649 PNMA6EA0A0J9YXQ4 647 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 USP17L12C9JPN9 530 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 USP17L21D6R901 530 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 DYNC1LI2O43237 492 aaPredicted RBP13.37□□□□□ -0.27
CASC3-208ENST00000583649 FDX1P10109 184 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 OAZ1P54368 228 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 BFSP2Q13515 415 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 KRT40Q6A162 431 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 SIAH1Q8IUQ4 282 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 AGBL1Q96MI9 1066 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
CASC3-208ENST00000583649 POLR3EQ9NVU0 708 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 DBNLQ9UJU6 430 aaKnown RBP13.37□□□□□ -0.27
CASC3-208ENST00000583649 GBF1Q92538 1859 aa13.37□□□□□ -0.27
CASC3-208ENST00000583649 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 KCNA5P22460 613 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
CASC3-208ENST00000583649 PTCRAQ6ISU1 281 aaPredicted RBP13.36□□□□□ -0.27
CASC3-208ENST00000583649 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
CASC3-208ENST00000583649 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 SDR42E1Q8WUS8 393 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 COG6Q9Y2V7 657 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 PRRC2BQ5JSZ5 2229 aaKnown RBP13.36□□□□□ -0.27
CASC3-208ENST00000583649 TNKSO95271 1327 aa13.36□□□□□ -0.27
CASC3-208ENST00000583649 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 CTAGE5O15320 804 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 ADCY6O43306 1168 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 CDK8P49336 464 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 CPT1AP50416 773 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 PKN1Q16512 942 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 PTPROQ16827 1216 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 CLEC10AQ8IUN9 316 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
CASC3-208ENST00000583649 CD320Q9NPF0 282 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 PRKAG3Q9UGI9 489 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 FEM1BQ9UK73 627 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 GNEQ9Y223 722 aaKnown RBP13.35□□□□□ -0.27
CASC3-208ENST00000583649 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 RAD50Q92878 1312 aa13.35□□□□□ -0.27
CASC3-208ENST00000583649 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.34□□□□□ -0.27
CASC3-208ENST00000583649 PARNO95453 639 aaKnown RBP13.34□□□□□ -0.27
CASC3-208ENST00000583649 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
CASC3-208ENST00000583649 FAM47CQ5HY64 1035 aa13.34□□□□□ -0.27
CASC3-208ENST00000583649 ERC1Q8IUD2 1116 aa13.34□□□□□ -0.27
CASC3-208ENST00000583649 DYNLL2Q96FJ2 89 aa13.34□□□□□ -0.27
CASC3-208ENST00000583649 TGS1Q96RS0 853 aaKnown RBP13.34□□□□□ -0.27
CASC3-208ENST00000583649 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
CASC3-208ENST00000583649 RAVER2Q9HCJ3 691 aaKnown RBP13.34□□□□□ -0.27
CASC3-208ENST00000583649 CHD7Q9P2D1 2997 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms