RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 TDRD3Q9H7E2 651 aaKnown RBP6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PI4KBQ9UBF8 816 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PCDHA6Q9UN73 950 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 PCDHA8Q9Y5H6 950 aa6.27□□□□□ -1.41
CRLF3-204ENST00000583527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.27□□□□□ -1.41
CRLF3-204ENST00000583527 COL11A1P12107 1806 aaPredicted RBP6.27□□□□□ -1.41
CRLF3-204ENST00000583527 SYNRGQ9UMZ2 1314 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 FOXN1O15353 648 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 POLR2DO15514 142 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 NEMFO60524 1076 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 PPP1R11O60927 126 aaPredicted RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 NDUFB10O96000 172 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 OR52Z1P0C646 297 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 MSNP26038 577 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 CLCN1P35523 988 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 TXLNAP40222 546 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 PTGDRQ13258 359 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ORC2Q13416 577 aaPredicted RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 SEPT2Q15019 361 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 NONOQ15233 471 aaKnown RBP eCLIP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 DLGAP5Q15398 846 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 CDC37Q16543 378 aaPredicted RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ABCB5Q2M3G0 1257 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 LONRF3Q496Y0 759 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 DALRD3Q5D0E6 543 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 GPATCH4Q5T3I0 446 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 TATDN1Q6P1N9 297 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 KCTD1Q719H9 257 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 PDILTQ8N807 584 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ZMYND12Q9H0C1 365 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 TMEM60Q9H2L4 133 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 C6orf50Q9HD87 102 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 GPCPD1Q9NPB8 672 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ZNF70Q9UC06 446 aaPredicted RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 SERTAD1Q9UHV2 236 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 HOOK1Q9UJC3 728 aaKnown RBP6.26□□□□□ -1.41
CRLF3-204ENST00000583527 MAN1B1Q9UKM7 699 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 HDAC9Q9UKV0 1011 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ZBTB21Q9ULJ3 1066 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 ZNRF3Q9ULT6 936 aa6.26□□□□□ -1.41
CRLF3-204ENST00000583527 LTBP3Q9NS15 1303 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 POTEFA5A3E0 1075 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 BECN2A8MW95 431 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 GOLGA6L6A8MZA4 724 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TCP10L2B9ZVM9 353 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 GH2P01242 217 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 VIL1P09327 827 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 EEF2P13639 858 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PTGS1P23219 599 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 GNA11P29992 359 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 LONP1P36776 959 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TNNI2P48788 182 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 MYL5Q02045 173 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 RASSF7Q02833 373 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 NCAPHQ15003 741 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 E2F4Q16254 413 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 CERKLQ49MI3 558 aaPredicted RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 ARL6IP4Q66PJ3 421 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SLFN13Q68D06 897 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TTBK2Q6IQ55 1244 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PDXDC2PQ6P474 469 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 NEK8Q86SG6 692 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 ELOA2Q8IYF1 753 aaPredicted RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TRIML1Q8N9V2 468 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SPC24Q8NBT2 197 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 GMCL1P1Q8NEA9 526 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 AGBL3Q8NEM8 1001 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SMARCE1Q969G3 411 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 MTMR8Q96EF0 704 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 CCDC34Q96HJ3 373 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 GMCL1Q96IK5 515 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 ZBED3Q96IU2 234 aaPredicted RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 EPSTI1Q96J88 318 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PRMT6Q96LA8 375 aaPredicted RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 NUP88Q99567 741 aaPredicted RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SGIP1Q9BQI5 828 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PYM1Q9BRP8 204 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TRIM5Q9C035 493 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 UBA5Q9GZZ9 404 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 VPS33BQ9H267 617 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 KCNF1Q9H3M0 494 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 KANSL2Q9H9L4 492 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 JMJD4Q9H9V9 463 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 VEZTQ9HBM0 779 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SCUBE2Q9NQ36 999 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 TMEM260Q9NX78 707 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PIM2Q9P1W9 311 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 NYAP2Q9P242 653 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 CLIP2Q9UDT6 1046 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 HERC5Q9UII4 1024 aaKnown RBP6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SYNPO2Q9UMS6 1093 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 SSC5DA1L4H1 1573 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 LCTP09848 1927 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 RLFQ13129 1914 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 LRRC37A2A6NM11 1700 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 ZNF541Q9H0D2 1346 aa6.25□□□□□ -1.41
CRLF3-204ENST00000583527 PNMA6FA0A0J9YX94 578 aa6.24□□□□□ -1.41
CRLF3-204ENST00000583527 SHTN1A0MZ66 631 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms