RNA–Protein interactions for RNA: ENST00000583514.5

LLGL2-221, Transcript of LLGL2, scribble cell polarity complex component, human

TSL 3

Gene LLGL2, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LLGL2-221	ENST00000583514	SH3RF1	Q7Z6J0	888 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	ZNF467	Q7Z7K2	595 aa	Predicted RBP	18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	FAM160B2	Q86V87	743 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	STAG1	Q8WVM7	1258 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	FAM227B	Q96M60	508 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	PDLIM7	Q9NR12	457 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	ANAPC4	Q9UJX5	808 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514	SMCHD1	A6NHR9	2005 aa		18.39	■□□□□ 0.53
LLGL2-221	ENST00000583514		A0A0D9SFI3	127 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514		A0A1W2PQ45	241 aa	Predicted RBP	18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514		A0A1W2PQY0	241 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	TRIM43B	A6NCK2	446 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	ADAMTS4	O75173	837 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	ACVR2B	Q13705	512 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	BAD	Q92934	168 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	FGD4	Q96M96	766 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	AGBL1	Q96MI9	1066 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	LNPK	Q9C0E8	428 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	MTMR7	Q9Y216	660 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	SYNRG	Q9UMZ2	1314 aa		18.38	■□□□□ 0.53
LLGL2-221	ENST00000583514	MYH4	Q9Y623	1939 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	FGA	P02671	866 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	SNAP25	P60880	206 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	CNTN2	Q02246	1040 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	ALX1	Q15699	326 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	MCMDC2	Q4G0Z9	681 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	RCSD1	Q6JBY9	416 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	RASGRP2	Q7LDG7	609 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	TSEN34	Q9BSV6	310 aa	Known RBP	18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	ACAD9	Q9H845	621 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	TOMM22	Q9NS69	142 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	RBM19	Q9Y4C8	960 aa	Known RBP	18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	ZNF536	O15090	1300 aa		18.37	■□□□□ 0.53
LLGL2-221	ENST00000583514	TRIM6-TRIM34	B2RNG4	842 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	ORC4	O43929	436 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	PLA2G6	O60733	806 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	PQBP1	O60828	265 aa	Known RBP	18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	ACLY	P53396	1101 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	NUCB1	Q02818	461 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	KCNA10	Q16322	511 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	CCDC174	Q6PII3	467 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	ARMCX2	Q7L311	632 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	CCDC144CP	Q8IYA2	1237 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	KLHDC9	Q8NEP7	349 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	ABHD16B	Q9H3Z7	469 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	RNF146	Q9NTX7	359 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	MTMR10	Q9NXD2	777 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	PLXNA1	Q9UIW2	1896 aa		18.36	■□□□□ 0.53
LLGL2-221	ENST00000583514	MYADML2	A6NDP7	307 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	POTEB2	H3BUK9	544 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	ADCY6	O43306	1168 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	DUSP11	O75319	330 aa	Known RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	CLTB	P09497	229 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	FGR	P09769	529 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	ALAS1	P13196	640 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	IRX5	P78411	483 aa	Predicted RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	NMI	Q13287	307 aa	Predicted RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	SHH	Q15465	462 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	CCDC144B	Q3MJ40	725 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	RRP12	Q5JTH9	1297 aa	Known RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	C9orf50	Q5SZB4	431 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	ZNF589	Q86UQ0	364 aa	Predicted RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	SLC17A8	Q8NDX2	589 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	TRERF1	Q96PN7	1200 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	BACH2	Q9BYV9	841 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	A1CF	Q9NQ94	594 aa	Known RBP	18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	PRR12	Q9ULL5	1215 aa		18.35	■□□□□ 0.53
LLGL2-221	ENST00000583514	C6orf222	P0C671	652 aa	Predicted RBP	18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	HSPD1	P10809	573 aa	Known RBP	18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	ITGB8	P26012	769 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	PDE4A	P27815	886 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	NOV	P48745	357 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	CCDC96	Q2M329	555 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	TKFC	Q3LXA3	575 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	CCSAP	Q6IQ19	270 aa	Predicted RBP	18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	TICAM2	Q86XR7	235 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	FAM133A	Q8N9E0	248 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	NUP133	Q8WUM0	1156 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	RILPL2	Q969X0	211 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	STARD7	Q9NQZ5	370 aa		18.34	■□□□□ 0.53
LLGL2-221	ENST00000583514	SOWAHB	A6NEL2	793 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	MOXD2P	A6NHM9	499 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	HAND2	P61296	217 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	KATNBL1	Q9H079	304 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	SPC25	Q9HBM1	224 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	TMEM39A	Q9NV64	488 aa		18.33	■□□□□ 0.52
LLGL2-221	ENST00000583514	KIAA0355	O15063	1070 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	RAG1	P15918	1043 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	SLC16A2	P36021	539 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	MUM1L1	Q5H9M0	696 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	TTBK2	Q6IQ55	1244 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	CHD1L	Q86WJ1	897 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	DCAF4	Q8WV16	495 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	TMEM47	Q9BQJ4	181 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	CCPG1	Q9ULG6	757 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	STXBP5L	Q9Y2K9	1186 aa		18.32	■□□□□ 0.52
LLGL2-221	ENST00000583514	CCDC171	Q6TFL3	1326 aa		18.31	■□□□□ 0.52
LLGL2-221	ENST00000583514	DCDC2C	A8MYV0	355 aa		18.31	■□□□□ 0.52

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