RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 OTOP2Q7RTS6 562 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 KIFC2Q96AC6 838 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 KIF1BPQ96EK5 621 aa14.75□□□□□ -0.05
TOP3A-215ENST00000583328 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.75□□□□□ -0.05
TOP3A-215ENST00000583328 RAVER2Q9HCJ3 691 aaKnown RBP14.75□□□□□ -0.05
TOP3A-215ENST00000583328 ATP2A1O14983 1001 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 NDUFB10O96000 172 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 CD4P01730 458 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 BEX3Q00994 111 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 STK11IPQ8N1F8 1099 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 MICALL1Q8N3F8 863 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 YTHDC1Q96MU7 727 aaKnown RBP14.74□□□□□ -0.05
TOP3A-215ENST00000583328 HIPK3Q9H422 1215 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 MKNK2Q9HBH9 465 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 FBXO40Q9UH90 709 aa14.74□□□□□ -0.05
TOP3A-215ENST00000583328 YBX2Q9Y2T7 364 aaKnown RBP14.74□□□□□ -0.05
TOP3A-215ENST00000583328 RABGGTBP53611 331 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CCL23P55773 120 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 TNFAIP2Q03169 654 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 UBE3CQ15386 1083 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CXCL17Q6UXB2 119 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CCDC144CPQ8IYA2 1237 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CHST13Q8NET6 341 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 C1QTNF1Q9BXJ1 281 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CLIP2Q9UDT6 1046 aa14.73□□□□□ -0.05
TOP3A-215ENST00000583328 CTAGE5O15320 804 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 CABYRO75952 493 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 CHGBP05060 677 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 ITGA7Q13683 1181 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 SKIV2LQ15477 1246 aaKnown RBP14.72□□□□□ -0.05
TOP3A-215ENST00000583328 PPP2R2DQ66LE6 453 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.72□□□□□ -0.05
TOP3A-215ENST00000583328 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
TOP3A-215ENST00000583328 SLC43A3Q8NBI5 491 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 FGD4Q96M96 766 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 NECAB3Q96P71 396 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-215ENST00000583328 SLC38A10Q9HBR0 1119 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 ARPP21Q9UBL0 812 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-215ENST00000583328 FEM1BQ9UK73 627 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 SLC4A7Q9Y6M7 1214 aa14.72□□□□□ -0.05
TOP3A-215ENST00000583328 UMODL1Q5DID0 1318 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-215ENST00000583328 ZBBXA8MT70 800 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 ZEB2O60315 1214 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 BMP1P13497 986 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 ATP5JP18859 108 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 RASA1P20936 1047 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 NKX3-2P78367 333 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 CNTN2Q02246 1040 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 AAK1Q2M2I8 961 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 ZSCAN25Q6NSZ9 544 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 HAUS7Q99871 368 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 PUS7LQ9H0K6 701 aaKnown RBP14.71□□□□□ -0.05
TOP3A-215ENST00000583328 AP5M1Q9H0R1 490 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 HOMER2Q9NSB8 354 aa14.71□□□□□ -0.05
TOP3A-215ENST00000583328 NCOR1O75376 2440 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 MINDY4BA8MYZ0 360 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 DYNC1LI2O43237 492 aaPredicted RBP14.7□□□□□ -0.06
TOP3A-215ENST00000583328 RAB11FIP3O75154 756 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 HMMRO75330 724 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 MYOGP15173 224 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 OAZ1P54368 228 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 TFF2Q03403 129 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 SEZ6LQ9BYH1 1024 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 KATNBL1Q9H079 304 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 TRPV6Q9H1D0 765 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 PCDHA11Q9Y5I1 949 aa14.7□□□□□ -0.06
TOP3A-215ENST00000583328 PLXNA1Q9UIW2 1896 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 COL11A1P12107 1806 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ASB14A6NK59 587 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ATP2A2P16615 1042 aaKnown RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 FSCN1Q16658 493 aaKnown RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 SBK1Q52WX2 424 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 TLK2Q86UE8 772 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 RPAP2Q8IXW5 612 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ZNF444Q8N0Y2 327 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 PANK1Q8TE04 598 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 NOC4LQ9BVI4 516 aaKnown RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ACAD9Q9H845 621 aa14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 GNEQ9Y223 722 aaKnown RBP14.69□□□□□ -0.06
TOP3A-215ENST00000583328 ASTN1O14525 1302 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 GTPBP6O43824 516 aaPredicted RBP14.68□□□□□ -0.06
TOP3A-215ENST00000583328 B4GALT4O60513 344 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 FAM133AQ8N9E0 248 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 MKL1Q969V6 931 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 SCLYQ96I15 445 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 STRBPQ96SI9 672 aaKnown RBP14.68□□□□□ -0.06
TOP3A-215ENST00000583328 WNT8AQ9H1J5 351 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 COG6Q9Y2V7 657 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 MUC3AQ02505 3323 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 PARP14Q460N5 1801 aa14.68□□□□□ -0.06
TOP3A-215ENST00000583328 GRIN2DO15399 1336 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 IGKV6D-41A0A0C4DH26 115 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 SOWAHBA6NEL2 793 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 GSG1L2A8MUP6 293 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 RFXAPO00287 272 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 ERC2O15083 957 aa14.67□□□□□ -0.06
TOP3A-215ENST00000583328 FDX1P10109 184 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms