RNA–Protein interactions for RNA: ENST00000583085.1

STRADA-222, Transcript of STE20-related kinase adaptor alpha, human

Gene STRADA, Length 3,685 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-222	ENST00000583085	ZNF772	Q68DY9	489 aa	Predicted RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	TBCK	Q8TEA7	893 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	LZTS2	Q9BRK4	669 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	QSER1	Q2KHR3	1735 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085		H0YIN7	160 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	NOV	P48745	357 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	ADK	P55263	362 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	EN1	Q05925	392 aa	Predicted RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	CREBRF	Q8IUR6	639 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	IGKV6D-41	A0A0C4DH26	115 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	PPP1R11	O60927	126 aa	Predicted RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	LONP1	P36776	959 aa	Known RBP	13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	RRAGB	Q5VZM2	374 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	GSDMA	Q96QA5	445 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	RIOX1	Q9H6W3	641 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	DISC1	Q9NRI5	854 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	DACH1	Q9UI36	760 aa		13.75	□□□□□ -0.21
STRADA-222	ENST00000583085	CBFA2T2	O43439	604 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	SOGA3	Q5TF21	947 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	CCDC150	Q8NCX0	1101 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	GJA10	Q969M2	543 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	SUGT1	Q9Y2Z0	365 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	TTLL1	O95922	423 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	UBE2S	Q16763	222 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	CEP135	Q66GS9	1140 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	HHIPL2	Q6UWX4	724 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	SH3BP5L	Q7L8J4	393 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	POTED	Q86YR6	584 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	ADGRF4	Q8IZF3	695 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	C6orf50	Q9HD87	102 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	DYNC1I1	O14576	645 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	RXRB	P28702	533 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	TEC	P42680	631 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	NT5C2	P49902	561 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	NAA30	Q147X3	362 aa	Predicted RBP	13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	NONO	Q15233	471 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	DACT2	Q5SW24	774 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	PODN	Q7Z5L7	613 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	FAM198A	Q9UFP1	575 aa		13.74	□□□□□ -0.21
STRADA-222	ENST00000583085	UBA7	P41226	1012 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	DHX8	Q14562	1220 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	PTPN14	Q15678	1187 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	CCDC96	Q2M329	555 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	NYAP1	Q6ZVC0	841 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	REXO1	Q8N1G1	1221 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	EEF2KMT	Q96G04	330 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	CCDC34	Q96HJ3	373 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	JMJD4	Q9H9V9	463 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	SIPA1L1	O43166	1804 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	USP17L10	C9JJH3	530 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	ERCC5	P28715	1186 aa	Predicted RBP	13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	APTX	Q7Z2E3	356 aa	Known RBP	13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	PLIN4	Q96Q06	1357 aa		13.73	□□□□□ -0.21
STRADA-222	ENST00000583085	EDIL3	O43854	480 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	RPN1	P04843	607 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	ZNF710	Q8N1W2	664 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	FLAD1	Q8NFF5	587 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	PPP1R13B	Q96KQ4	1090 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TRIM49B	A6NDI0	452 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	GTPBP6	O43824	516 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	GDF11	O95390	407 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TDP2	O95551	362 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	HLA-DOA	P06340	250 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	GNA11	P29992	359 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TXLNA	P40222	546 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	CCT6A	P40227	531 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	SNAP25	P60880	206 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	ZNF543	Q08ER8	600 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	SPATA1	Q5VX52	437 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	GALNT17	Q6IS24	598 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	NEK8	Q86SG6	692 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	ZDHHC15	Q96MV8	337 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TDRD3	Q9H7E2	651 aa	Known RBP	13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	C21orf2	O43822	256 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	SLC37A4	O43826	429 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	SNHG28	P0DPA3	235 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TAL1	P17542	331 aa	Predicted RBP	13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	TXK	P42681	527 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	KRT25	Q7Z3Z0	450 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	CPLX3	Q8WVH0	158 aa		13.72	□□□□□ -0.21
STRADA-222	ENST00000583085	OR52Z1	P0C646	297 aa		13.71	□□□□□ -0.21
STRADA-222	ENST00000583085	PLCG1	P19174	1290 aa		13.71	□□□□□ -0.21
STRADA-222	ENST00000583085	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.71	□□□□□ -0.21
STRADA-222	ENST00000583085	PRCP	P42785	496 aa		13.71	□□□□□ -0.21
STRADA-222	ENST00000583085	NR1I3	Q14994	352 aa		13.71	□□□□□ -0.21
STRADA-222	ENST00000583085	TNNI2	P48788	182 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	ASPRV1	Q53RT3	343 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	STRIP1	Q5VSL9	837 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	SPECC1L	Q69YQ0	1117 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	TMEM139	Q8IV31	216 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	SWAP70	Q9UH65	585 aa		13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	TNS1	Q9HBL0	1735 aa	Known RBP	13.71	□□□□□ -0.22
STRADA-222	ENST00000583085	YDJC	A8MPS7	323 aa		13.7	□□□□□ -0.22
STRADA-222	ENST00000583085	EEF2	P13639	858 aa	Known RBP	13.7	□□□□□ -0.22
STRADA-222	ENST00000583085	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
STRADA-222	ENST00000583085	PMS1	P54277	932 aa	Known RBP	13.7	□□□□□ -0.22
STRADA-222	ENST00000583085	JAG1	P78504	1218 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms