RNA–Protein interactions for RNA: ENST00000582981.5

TOP3A-214, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,239 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-214ENST00000582981 NUP188Q5SRE5 1749 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 TTC26A0AVF1 554 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 KCNJ18B7U540 433 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
TOP3A-214ENST00000582981 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 KCNJ12Q14500 433 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 SEC23AQ15436 765 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 FBXO3Q9UK99 471 aa11.75□□□□□ -0.53
TOP3A-214ENST00000582981 MYH7P12883 1935 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 ZPR1O75312 459 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 ATP1A1P05023 1023 aaKnown RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 GOLGA8HP0CJ92 632 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 NPY5RQ15761 445 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 NAPGQ99747 312 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 REXO2Q9Y3B8 237 aaKnown RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 COL18A1P39060 1754 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 PKD1L3Q7Z443 1732 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 CALRP27797 417 aaKnown RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 ARHGAP25P42331 645 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 CLNS1AP54105 237 aaKnown RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 MAP2K1Q02750 393 aaPredicted RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 CDKAL1Q5VV42 579 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 KRT26Q7Z3Y9 468 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 STAG2Q8N3U4 1231 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 PRPF38AQ8NAV1 312 aaKnown RBP11.74□□□□□ -0.53
TOP3A-214ENST00000582981 ZNF384Q8TF68 577 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 PHF20Q9BVI0 1012 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 EHD2Q9NZN4 543 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 ALS2Q96Q42 1657 aa11.74□□□□□ -0.53
TOP3A-214ENST00000582981 GOLGA6BA6NDN3 693 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 XBP1P17861 261 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 ERCC5P28715 1186 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 CDR1P51861 262 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 PAK1Q13153 545 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 NKX1-1Q15270 411 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 E2F5Q15329 346 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 SCLT1Q96NL6 688 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 PANX2Q96RD6 677 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 MMS19Q96T76 1030 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 AGPAT5Q9NUQ2 364 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 COL5A2P05997 1499 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 B4DLN1 442 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 CHUKO15111 745 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 PRDX5P30044 214 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 PBX1P40424 430 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 ATP1A2P50993 1020 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 NAA25Q14CX7 972 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 ALX1Q15699 326 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 IQCA1Q86XH1 822 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 SPATA20Q8TB22 786 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 SLAIN2Q9P270 581 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 BAZ2AQ9UIF9 1905 aaKnown RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 RCCD1A6NED2 376 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 STAT6P42226 847 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 FUT2Q10981 343 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 TROAPQ12815 778 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 PDCLQ13371 301 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 TYW1BQ6NUM6 668 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 ANKRD13CQ8N6S4 541 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 SLC44A5Q8NCS7 719 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 TRIM47Q96LD4 638 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
TOP3A-214ENST00000582981 TMEM60Q9H2L4 133 aa11.73□□□□□ -0.53
TOP3A-214ENST00000582981 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 IRF6O14896 467 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 PLEKP08567 350 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 MYBL2P10244 700 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CXCR5P32302 372 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 PEX19P40855 299 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 INF2Q27J81 1249 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CEP85LQ5SZL2 805 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CCDC122Q5T0U0 273 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 KANK3Q6NY19 840 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CNGA4Q8IV77 575 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 COG1Q8WTW3 980 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CALR3Q96L12 384 aaKnown RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 LACRTQ9GZZ8 138 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 RNF41Q9H4P4 317 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 MYO6Q9UM54 1294 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 MROH5Q6ZUA9 1318 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 TSPY2A6NKD2 308 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 EZH2Q15910 746 aaKnown RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 ENOX2Q16206 610 aaKnown RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CCDC178Q5BJE1 867 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 TCP11X2Q5H9J9 407 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 MSL3Q8N5Y2 521 aaKnown RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 TRIML1Q8N9V2 468 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 CAGE1Q8TC20 777 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 LRRC15Q8TF66 581 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 FAXDC2Q96IV6 333 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 GPR101Q96P66 508 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 TRIM6Q9C030 488 aaPredicted RBP11.72□□□□□ -0.53
TOP3A-214ENST00000582981 VAT1LQ9HCJ6 419 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 ATRNO75882 1429 aa11.72□□□□□ -0.53
TOP3A-214ENST00000582981 EIF3HO15372 352 aaKnown RBP eCLIP11.71□□□□□ -0.537e-7■□□□□ 9.9
TOP3A-214ENST00000582981 RPN1P04843 607 aaKnown RBP11.71□□□□□ -0.53
TOP3A-214ENST00000582981 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms