RNA–Protein interactions for RNA: ENST00000582797.5

IFT20-212, Transcript of intraflagellar transport 20, humanhuman

TSL 2

Gene IFT20, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-212ENST00000582797 TMED8Q6PL24 325 aaPredicted RBP18.25■□□□□ 0.51
IFT20-212ENST00000582797 CXCL17Q6UXB2 119 aa18.25■□□□□ 0.51
IFT20-212ENST00000582797 FRAT1Q92837 279 aaPredicted RBP18.25■□□□□ 0.51
IFT20-212ENST00000582797 VWCEQ96DN2 955 aa18.25■□□□□ 0.51
IFT20-212ENST00000582797 TEX13BQ9BXU2 312 aa18.25■□□□□ 0.51
IFT20-212ENST00000582797 NOP58Q9Y2X3 529 aaKnown RBP18.25■□□□□ 0.51
IFT20-212ENST00000582797 MYH7P12883 1935 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 PTPRSQ13332 1948 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 EPOPA6NHQ4 379 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 ZBBXA8MT70 800 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 PRKAB2O43741 272 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 TLL1O43897 1013 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 ZNF467Q7Z7K2 595 aaPredicted RBP18.24■□□□□ 0.51
IFT20-212ENST00000582797 SLC43A3Q8NBI5 491 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 NOC4LQ9BVI4 516 aaKnown RBP18.24■□□□□ 0.51
IFT20-212ENST00000582797 TRPV6Q9H1D0 765 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 ABHD16BQ9H3Z7 469 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 ARMT1Q9H993 441 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 GOPCQ9HD26 462 aa18.24■□□□□ 0.51
IFT20-212ENST00000582797 ASTN1O14525 1302 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 TCRBV5S4A2TA0A5A2 114 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 CA3P07451 260 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 PTGS1P23219 599 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 CDK8P49336 464 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 ARMCX2Q7L311 632 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 ALYREFQ86V81 257 aaKnown RBP18.23■□□□□ 0.51
IFT20-212ENST00000582797 TMEM57Q8N5G2 664 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 SCLYQ96I15 445 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 SLF1Q9BQI6 1058 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 KATNBL1Q9H079 304 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 GRIN2DO15399 1336 aa18.23■□□□□ 0.51
IFT20-212ENST00000582797 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.22■□□□□ 0.51
IFT20-212ENST00000582797 GTPBP6O43824 516 aaPredicted RBP18.22■□□□□ 0.51
IFT20-212ENST00000582797 ATP2A2P16615 1042 aaKnown RBP18.22■□□□□ 0.51
IFT20-212ENST00000582797 POU3F3P20264 500 aaPredicted RBP18.22■□□□□ 0.51
IFT20-212ENST00000582797 SLFNL1Q499Z3 407 aa18.22■□□□□ 0.51
IFT20-212ENST00000582797 AACSQ86V21 672 aa18.22■□□□□ 0.51
IFT20-212ENST00000582797 CPXCR1Q8N123 301 aa18.22■□□□□ 0.51
IFT20-212ENST00000582797 CCDC17Q96LX7 622 aa18.22■□□□□ 0.51
IFT20-212ENST00000582797 TANC1Q9C0D5 1861 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 IPO8O15397 1037 aaKnown RBP18.21■□□□□ 0.51
IFT20-212ENST00000582797 B4GALT4O60513 344 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 GPR37L1O60883 481 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 ITGA7Q13683 1181 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 TTLL4Q14679 1199 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 C12orf60Q5U649 245 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 CCDC144CPQ8IYA2 1237 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 COG5Q9UP83 839 aa18.21■□□□□ 0.51
IFT20-212ENST00000582797 ARHGEF15O94989 841 aa18.2■□□□□ 0.5
IFT20-212ENST00000582797 NKX3-2P78367 333 aa18.2■□□□□ 0.5
IFT20-212ENST00000582797 TTF1Q15361 905 aaPredicted RBP18.2■□□□□ 0.5
IFT20-212ENST00000582797 C16orf86Q6ZW13 317 aa18.2■□□□□ 0.5
IFT20-212ENST00000582797 ANKRD35Q8N283 1001 aa18.2■□□□□ 0.5
IFT20-212ENST00000582797 CD320Q9NPF0 282 aa18.2■□□□□ 0.5
IFT20-212ENST00000582797 LCTP09848 1927 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 GOLIM4O00461 696 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 MBD4O95243 580 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 PSMC6P62333 389 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 TNFAIP2Q03169 654 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 TMEM67Q5HYA8 995 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
IFT20-212ENST00000582797 RPUSD2Q8IZ73 545 aaKnown RBP18.19■□□□□ 0.5
IFT20-212ENST00000582797 AGBL1Q96MI9 1066 aa18.19■□□□□ 0.5
IFT20-212ENST00000582797 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.19■□□□□ 0.5
IFT20-212ENST00000582797 RAVER2Q9HCJ3 691 aaKnown RBP18.19■□□□□ 0.5
IFT20-212ENST00000582797 WDFY4Q6ZS81 3184 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 USP17L12C9JPN9 530 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 USP17L21D6R901 530 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 CNTN2Q02246 1040 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 FSCN1Q16658 493 aaKnown RBP18.18■□□□□ 0.5
IFT20-212ENST00000582797 ARNTL2Q8WYA1 636 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 HLA-CQ95604 372 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 DNAJC2Q99543 621 aaKnown RBP18.18■□□□□ 0.5
IFT20-212ENST00000582797 ATP8A2Q9NTI2 1148 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 EXOC6BQ9Y2D4 811 aa18.18■□□□□ 0.5
IFT20-212ENST00000582797 DDX49Q9Y6V7 483 aaKnown RBP18.18■□□□□ 0.5
IFT20-212ENST00000582797 ATP2A1O14983 1001 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.17■□□□□ 0.5
IFT20-212ENST00000582797 SPRED2Q7Z698 418 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 DEFB128Q7Z7B8 93 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 TLK2Q86UE8 772 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 PRPF38AQ8NAV1 312 aaKnown RBP18.17■□□□□ 0.5
IFT20-212ENST00000582797 KIFC2Q96AC6 838 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 IL1RAPL2Q9NP60 686 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 GNEQ9Y223 722 aaKnown RBP18.17■□□□□ 0.5
IFT20-212ENST00000582797 TET1Q8NFU7 2136 aa18.17■□□□□ 0.5
IFT20-212ENST00000582797 CABYRO75952 493 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 NDUFB10O96000 172 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 CHGBP05060 677 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 TAP1Q03518 808 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 TMEM63BQ5T3F8 832 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 HOMER2Q9NSB8 354 aa18.16■□□□□ 0.5
IFT20-212ENST00000582797 F5H6K3 240 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 PI4K2BG5E9Z4 385 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 ZBED4O75132 1171 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 CYP2C9P11712 490 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 SMPD1P17405 629 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 KLRC3Q07444 240 aa18.15■□□□□ 0.5
IFT20-212ENST00000582797 GRB10Q13322 594 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms